Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 84708

Identification

Species:
Selaginella moellendorffii
Gene model
84708
Description
e_gw1.6.1289.1
Family
PBF-2-like
3D structure (top 5)
1L3A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

471615 Score: 1

Arabidopsis thaliana

AT1G14410.1 Score: 1

Carica papaya

evm.TU.supercontig_249.7 Score: 1

Chlamydomonas reinhardtii

186648 Score: 1

Coccomyxa sp. C-169

77430 Score: 1

Micromonas pusilla CCMP1545

30105 Score: 1

Ostreococcus lucimarinus

8400 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g05350.1 Score: 1

Ostreococcus tauri

37364 Score: 1

Populus trichocarpa

420425 Score: 1

Sorghum bicolor

4769655 Score: 1

Vitis vinifera

GSVIVP00029003001 Score: 1

Zea mays

GRMZM2G117529_P01 Score: 1
GRMZM2G155662_P01 Score: 1

Expression data

Expressed Sequence Tags

At.12043
Arabidopsis thaliana ATWHY1/PTAC1 (A. THALIANA WHIRLY 1); DNA binding / telomeric DNA binding (ATWHY1/PTAC1) mRNA, complete cds /cds=p(95,886) /gb=NM_101308
Pth.11472
Populus trichocarpa clone WS0117_P12 unknown mRNA /cds=p(59,856) /gb=EF146407
Sbi.5740
WOUND1_59_A07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_59_A07_A002 5', mRNA sequence /clone=WOUND1_59_A07_A002 /clone_end=5' /gb=CN148887 /gi=45990264

Domain Architecture

Whirly PF08536 84708
DomainStartEndBit scoreE-value
Whirly371761975.2e-56

Sequences