Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 86070

Identification

Species:
Ostreococcus lucimarinus
Gene model
86070
Description
ost_01_008_087
Family
C3H
3D structure (top 5)
1VHN 1EP3 1Z41 1GTE 2H8Z
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Micromonas sp. RCC299

99494 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g02730.1 Score: 1

Sorghum bicolor

4760333 Score: 1

Selaginella moellendorffii

89139 Score: 1

Vitis vinifera

GSVIVP00035978001 Score: 1

Expression data

Expressed Sequence Tags

Hv.12164
HH04F04w HH Hordeum vulgare cDNA clone HH04F04 5-PRIME, mRNA sequence /clone=HH04F04 /clone_end=5' /gb=CB863303
Os.7618
Oryza sativa Japonica Group cDNA clone:J023009K15, full insert sequence /gb=AK111699
Ppa.4017
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_144788) mRNA, partial cds /cds=p(1,801) /gb=XM_001777252
Sbi.16982
FE1_17_C11.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA clone FE1_17_C11_A002 3', mRNA sequence /clone=FE1_17_C11_A002 /clone_end=3' /gb=CF071520 /gi=33108179

Domain Architecture

zf-CCCH PF00642 86070
DomainStartEndBit scoreE-value
zf-CCCH7810425.80.00016
zf-CCCH1141425.40.27
Dus250550150.54.7e-42

Sequences