Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 868053

Identification

Species:
Arabidopsis lyrata
Gene model
868053
Description
Al_scaffold_0004_216
Family
SET
3D structure (top 5)
2F69 2PB7 2R3A 1ML9 3F9X
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT2G22740.1 Score: 1
AT2G22740.2 Score: 1

Selaginella moellendorffii

104841 Score: 1

Arabidopsis lyrata

868053 Score: 1
902613 Score: 1

Zea mays

GRMZM2G001103_P01 Score: 1
GRMZM2G001103_P02 Score: 1
GRMZM2G124729_P01 Score: 1
GRMZM2G124729_P02 Score: 1

Chlamydomonas reinhardtii

6823 Score: 1

Expression data

Expressed Sequence Tags

At.12724
Arabidopsis thaliana putative SET-domain protein (At2g35160; T4C15.17) mRNA, complete cds /cds=p(198,2582) /gb=AY062735
At.28511
Arabidopsis thaliana putative mammalian MHC III region protein G9a (At2g22740) mRNA, complete cds /cds=p(113,2485) /gb=AY065374

Domain Architecture

YDG_SRA PF02182 868053
DomainStartEndBit scoreE-value
YDG_SRA346506313.44.7e-91
Pre-SET529626143.85.5e-40
SET628785196.38.3e-56

Sequences