Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 868356

Identification

Species:
Arabidopsis lyrata
Gene model
868356
Description
Al_scaffold_0004_519
Family
SET
3D structure (top 5)
2F69 2PB7 2R3A 1ML9 3F9X
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.15818
Arabidopsis thaliana SUVH7 (SUVH7) mRNA, complete cds /cds=p(1,2082) /gb=AF344450
At.66241
Arabidopsis thaliana SDG21 (SET DOMAIN GROUP 21) (SDG21) mRNA, complete cds /cds=p(1,2268) /gb=NM_128034
Vvi.14480
WIN1127.C21_D07 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1127_D07 3', mRNA sequence /clone=WIN1127_D07 /clone_end=3' /gb=EC986263

Domain Architecture

YDG_SRA PF02182 868356
DomainStartEndBit scoreE-value
YDG_SRA200351255.99.3e-74
Pre-SET380484129.11.4e-35
SET4866391706.8e-48

Sequences