Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 868909

Identification

Species:
Arabidopsis lyrata
Gene model
868909
Description
Al_scaffold_0004_1072
Family
HB
3D structure (top 5)
2DMN 1B72 1PUF 1DU6 1X2N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT2G27220.1 Score: 1

Expression data

Expressed Sequence Tags

At.52933
Arabidopsis thaliana BLH5 (BELL1-LIKE HOMEODOMAIN 5); DNA binding / transcription factor (BLH5) mRNA, complete cds /cds=p(1,1296) /gb=NM_128280
Mtr.13534
NF004E06ST1F1000 Developing stem Medicago truncatula cDNA clone NF004E06ST 5', mRNA sequence /clone=NF004E06ST /clone_end=5' /gb=AW688195
Mtr.22349
META209TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY474128
Os.11805
Oryza sativa (japonica cultivar-group) Os11g0158600 (Os11g0158600) mRNA, complete cds /cds=p(1,1278) /gb=NM_001072340

Domain Architecture

POX PF07526 868909
DomainStartEndBit scoreE-value
POX75197177.92.9e-50
Homeobox2302884.60.0042

Sequences