Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 88885

Identification

Species:
Ostreococcus lucimarinus
Gene model
88885
Description
ost_13_001_114
Family
SWI/SNF-SWI3
3D structure (top 5)
2DCE 2FQ3 2COM 2ELK 2YUS
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

472410 Score: 1

Arabidopsis thaliana

AT1G21700.1 Score: 1

Cyanidioschyzon merolae

CML061C Score: 1
CMM233C Score: 0.994

Chlorella sp. NC64A

134832 Score: 1

Carica papaya

evm.TU.supercontig_26.13 Score: 1

Micromonas sp. RCC299

104814 Score: 1
112657 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g08080.1 Score: 1

Ostreococcus tauri

36057 Score: 1

Physcomitrella patens

163618 Score: 1

Populus trichocarpa

559267 Score: 1

Sorghum bicolor

4822356 Score: 1

Selaginella moellendorffii

63207 Score: 1

Vitis vinifera

GSVIVP00015425001 Score: 1

Zea mays

GRMZM2G139760_P03 Score: 1
GRMZM2G139760_P04 Score: 0.99
GRMZM2G139760_P01 Score: 0.988
GRMZM2G139760_P02 Score: 0.978

Domain Architecture

SWIRM PF04433 88885
DomainStartEndBit scoreE-value
SWIRM33442247.16.2e-11
ZZ51856427.55e-05

Sequences