Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 896139

Identification

Species:
Arabidopsis lyrata
Gene model
896139
Description
scaffold_300109.1
Family
HB
3D structure (top 5)
2HDD 1B8I 2DA3 2CRA 1IG7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G01220.1 Score: 1

Carica papaya

evm.TU.supercontig_14.19 Score: 1

Expression data

Expressed Sequence Tags

At.41313
Arabidopsis thaliana mRNA for putative homeobox-leucine zipper protein, complete cds, clone: RAFL16-20-K05 /cds=p(114,974) /gb=AK228890
At.49022
Arabidopsis thaliana mRNA for homeobox protein, complete cds, clone: RAFL16-61-C06 /cds=p(284,1228) /gb=AK229364
At.68137
987288 CERES-148 Arabidopsis thaliana cDNA clone 147623 3', mRNA sequence /clone=147623 /clone_end=3' /gb=DR380834
Mtr.15423
MTYEH21TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV261238
Mtr.1797
EST646165 HOGA Medicago truncatula cDNA clone HOGA-27L15, mRNA sequence /clone=HOGA-27L15 /gb=CB893373
Pth.12518
WS01224.B21.1_M07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01224_M07 3', mRNA sequence /clone=WS01224_M07 /clone_end=3' /gb=CV236620

Domain Architecture

Homeobox PF00046 896139
DomainStartEndBit scoreE-value
Homeobox8714170.18.2e-18
HALZ14218662.51.6e-15

Sequences