Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 898633

Identification

Species:
Arabidopsis lyrata
Gene model
898633
Description
scaffold_302603.1
Family
C3H
3D structure (top 5)
1I84 1C1G
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT3G21810.1 Score: 1

Carica papaya

evm.TU.supercontig_8.228 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g06584.2 Score: 1

Physcomitrella patens

96790 Score: 1

Populus trichocarpa

562306 Score: 1

Selaginella moellendorffii

405518 Score: 1

Vitis vinifera

GSVIVP00026060001 Score: 1

Zea mays

GRMZM2G037741_P03 Score: 1.014
GRMZM2G037741_P05 Score: 1
GRMZM2G044398_P01 Score: 1
GRMZM2G044398_P02 Score: 0.963
GRMZM2G044398_P04 Score: 0.961

Expression data

Expressed Sequence Tags

At.5858
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT3G21810) mRNA, complete cds /cds=p(271,1584) /gb=NM_113076

Domain Architecture

zf-CCCH PF00642 898633
DomainStartEndBit scoreE-value
zf-CCCH73233.77.4e-07

Sequences