Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 902401

Identification

Species:
Arabidopsis lyrata
Gene model
902401
Description
scaffold_401902.1
Family
SET
3D structure (top 5)
2R3A 1ML9 3F9X 2RFI 1MVH
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT2G33290.1 Score: 1

Chlorella sp. NC64A

142107 Score: 1

Oryza sativa subsp. japonica

LOC_Os07g25450.1 Score: 1

Arabidopsis lyrata

332974 Score: 1
902401 Score: 1

Zea mays

GRMZM2G025924_P01 Score: 1
GRMZM2G034288_P01 Score: 1
GRMZM2G078835_P02 Score: 1
GRMZM2G112145_P01 Score: 1

Expression data

Expressed Sequence Tags

At.12115
Arabidopsis thaliana SUVH2 (SU(VAR)3-9 HOMOLOG 2) (SUVH2) mRNA, complete cds /cds=p(115,2070) /gb=NM_128889
At.3118
Arabidopsis thaliana SUVH9 (SU(VAR)3-9 HOMOLOG 9); histone-lysine N-methyltransferase/ zinc ion binding (SUVH9) mRNA, complete cds /cds=p(400,2352) /gb=NM_001036548
Os.26478
Oryza sativa Japonica Group cDNA clone:J013097K17, full insert sequence /cds=p(299,2353) /gb=AK067172

Domain Architecture

YDG_SRA PF02182 902401
DomainStartEndBit scoreE-value
YDG_SRA206361325.51e-94
Pre-SET3914901507e-42
SET4926471375.8e-38

Sequences