Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 910487

Identification

Species:
Arabidopsis lyrata
Gene model
910487
Description
scaffold_602544.1
Family
Pseudo ARR-B
3D structure (top 5)
1KGS 2QVG 3CG0 1DCF 2OQR
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G24470.1 Score: 1

Carica papaya

evm.TU.supercontig_3.156 Score: 1

Micromonas pusilla CCMP1545

48139 Score: 1

Ostreococcus lucimarinus

29755 Score: 1
41670 Score: 1

Populus trichocarpa

422771 Score: 1

Vitis vinifera

GSVIVP00026171001 Score: 1

Expression data

Expressed Sequence Tags

At.1676
Arabidopsis thaliana APRR3 (PSEUDO-RESPONSE REGULATOR 3); transcription regulator (APRR3) mRNA, complete cds /cds=p(397,1884) /gb=NM_125403
At.21641
Arabidopsis thaliana APRR5 (PSEUDO-RESPONSE REGULATOR 5); transcription regulator (APRR5) mRNA, complete cds /cds=p(1,2004) /gb=NM_122355
Mtr.19448
MTYCY38TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV256565
Os.12795
Oryza sativa Japonica Group cDNA clone:J013001E13, full insert sequence /gb=AK120059
Os.58539
Oryza sativa Japonica Group cDNA clone:J023077E22, full insert sequence /gb=AK121136
Sbi.10157
PIC1_53_A05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM325806
Vvi.23600
CA12EI204IIF_C02 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI204IIF_C02 5', mRNA sequence /clone=CA12EI204IIF_C02 /clone_end=5' /gb=CA815595

Domain Architecture

Response_reg PF00072 910487
DomainStartEndBit scoreE-value
Response_reg5416568.82e-17
CCT50655087.74.2e-23

Sequences