Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 913493

Identification

Species:
Arabidopsis lyrata
Gene model
913493
Description
scaffold_701235.1
Family
HB
3D structure (top 5)
2ECB 2DMQ 2ECC 2DA2 2DA3
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT4G29940.1 Score: 1

Carica papaya

evm.TU.supercontig_95.13 Score: 1

Ostreococcus lucimarinus

89717 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g05450.1 Score: 1

Physcomitrella patens

170895 Score: 1

Populus trichocarpa

560666 Score: 1

Sorghum bicolor

5054671 Score: 1

Vitis vinifera

GSVIVP00009253001 Score: 1

Zea mays

GRMZM2G033138_P02 Score: 1

Expression data

Expressed Sequence Tags

At.19983
Arabidopsis thaliana homeodomain protein (PRHA) mRNA, complete cds /cds=p(215,2605) /gb=L21991
Ppa.17245
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_170895) mRNA, complete cds /cds=p(1,2379) /gb=XM_001779822

Domain Architecture

PHD PF00628 913493
DomainStartEndBit scoreE-value
PHD19224774.73.4e-19
Homeobox46051618.30.00019

Sequences