Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 93001

Identification

Species:
Physcomitrella patens
Gene model
93001
Description
fgenesh1_pg.scaffold_235000001
Family
Jumonji
3D structure (top 5)
2W2I 2OX0 2JRZ 1C20 2EQY
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Micromonas pusilla CCMP1545

19881 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g05680.1 Score: 1

Selaginella moellendorffii

956 Score: 1

Vitis vinifera

GSVIVP00000415001 Score: 1

Expression data

Expressed Sequence Tags

At.22811
Arabidopsis thaliana transcription factor jumonji (jmjC) domain-containing protein (AT1G63490) mRNA, complete cds /cds=p(85,3435) /gb=NM_105028

Domain Architecture

JmjN PF02375 93001
DomainStartEndBit scoreE-value
JmjN347892.71.2e-24
PHD24729550.94.5e-12
JmjC420577175.31.6e-49

Sequences