Gene model: 94754

Species: Physcomitrella patens Gene model 94754 Description fgenesh1_pg.scaffold_267000029 Family MADS 3D structure (top 5) 1K6O 1MNM 1N6J 1EGW 1HBX
	PDB entry: 1K6O 1MNM 1N6J 1EGW 1HBX

• JGI/DOE

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

896196 Score: 1

Physcomitrella patens

109598 Score: 1
143861 Score: 1
94754 Score: 1

Arabidopsis thaliana

AT2G42830.1 Score: 1
AT3G02310.1 Score: 1
AT3G58780.1 Score: 1
AT4G09960.1 Score: 1
AT4G09960.3 Score: 1
AT5G15800.2 Score: 1
AT2G42830.2 Score: 0.981
AT3G58780.2 Score: 0.932
AT5G15800.1 Score: 0.926

Physcomitrella patens

109598 Score: 1
94754 Score: 1

Carica papaya

evm.TU.supercontig_43.69 Score: 1
evm.TU.supercontig_660.2 Score: 1

Populus trichocarpa

420382 Score: 1
660583 Score: 1

Physcomitrella patens

83991 Score: 1
94754 Score: 1

Sorghum bicolor

4808556 Score: 1

Physcomitrella patens

109598 Score: 1
140819 Score: 1
83991 Score: 1
94754 Score: 1

Vitis vinifera

GSVIVP00002777001 Score: 1
GSVIVP00011492001 Score: 1
GSVIVP00015065001 Score: 1
GSVIVP00021934001 Score: 1
GSVIVP00030008001 Score: 1

Physcomitrella patens

109598 Score: 1
94754 Score: 1

Zea mays

GRMZM2G003514_P01 Score: 1
GRMZM2G027930_P01 Score: 1
GRMZM2G028601_P01 Score: 1
GRMZM2G099522_P01 Score: 1
GRMZM2G027930_P02 Score: 0.961
GRMZM2G099522_P02 Score: 0.961

• NCBI EST Profile Viewer (UniGene: Hv.20740)
• NCBI EST Profile Viewer (UniGene: Os.2352)
• NCBI EST Profile Viewer (UniGene: Ppa.11350)
• NCBI EST Profile Viewer (UniGene: Ppa.11486)
• NCBI EST Profile Viewer (UniGene: Ppa.16)
• NCBI EST Profile Viewer (UniGene: Ppa.25628)
• NCBI EST Profile Viewer (UniGene: Vvi.135)
• NCBI EST Profile Viewer (UniGene: Vvi.18144)
• NCBI EST Profile Viewer (UniGene: Vvi.4)

Hv.20740

Hordeum vulgare subsp. vulgare AGAMOUS-like protein 2 HvAG2 (AG2) mRNA, complete cds /cds=p(90,788) /gb=AF486649

Os.2352

Oryza sativa (japonica cultivar-group) MADS-box protein RMADS213 mRNA, complete cds /cds=p(138,887) /gb=AY551918

Ppa.11350

CAYY2860.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY2860 5', mRNA sequence /clone=CAYY2860 /clone_end=5' /gb=FC354011

Ppa.11486

Physcomitrella patens subsp. patens mRNA for MADS-box protein PpMADS1, complete cds /cds=p(498,1343) /gb=AB067688

Ppa.16

Physcomitrella patens MADS-domain protein PPM1 (ppm1) mRNA, complete cds /cds=p(26,877) /gb=AF150931

Ppa.25628

Physcomitrella patens MADS-domain protein PPM2 (ppm2) mRNA, complete cds /cds=p(239,1093) /gb=AF150933

Vvi.135

Vitis vinifera MAD-box transcripion factor (mads1) mRNA, complete cds /cds=p(200,877) /gb=AF265562

Vvi.18144

Vitis vinifera AP1-like protein mRNA, complete cds /cds=p(167,892) /gb=AY538746

Vvi.4

Vitis vinifera MADS-box protein 2 (MADS2) mRNA, complete cds /cds=p(103,837) /gb=AF373601

protein sequence
transcript sequence