Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: 96986

Identification

Species:
Selaginella moellendorffii
Gene model
96986
Description
e_gw1.19.368.1
Family
MYB-related
3D structure (top 5)
2CUJ 2AQE 2ELJ 1GV2 2K9N
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

478110 Score: 1

Arabidopsis thaliana

AT3G07740.3 Score: 1
AT3G07740.1 Score: 0.94

Cyanidioschyzon merolae

CMP134C Score: 1

Carica papaya

evm.TU.supercontig_27.257 Score: 1

Chlamydomonas reinhardtii

290570 Score: 1

Coccomyxa sp. C-169

15201 Score: 1

Micromonas pusilla CCMP1545

35008 Score: 1

Micromonas sp. RCC299

82818 Score: 1

Ostreococcus lucimarinus

2829 Score: 1
51202 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g53960.1 Score: 1
LOC_Os03g53960.2 Score: 0.982

Ostreococcus tauri

20688 Score: 1

Physcomitrella patens

173268 Score: 1

Populus trichocarpa

247017 Score: 1

Sorghum bicolor

4867867 Score: 1

Vitis vinifera

GSVIVP00029107001 Score: 1

Zea mays

GRMZM2G177958_P01 Score: 1
GRMZM2G129817_P01 Score: 0.911

Expression data

Expressed Sequence Tags

Os.59266
Oryza sativa Japonica Group cDNA clone:J023128E10, full insert sequence /cds=p(258,1961) /gb=AK072597
Ppa.1158
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_173268) mRNA, complete cds /cds=p(108,1640) /gb=XM_001784916
Ppa.6392
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_116913) mRNA, complete cds /cds=p(1,1728) /gb=XM_001755447
Pth.11830
F099P79.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F099P79 3', mRNA sequence /clone=F099P79 /clone_end=3' /gb=CK091432
Sbi.8578
RHOH1_44_H08.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_44_H08_A002 5', mRNA sequence /clone=RHOH1_44_H08_A002 /clone_end=5' /gb=CN130944 /gi=45959951

Domain Architecture

ZZ PF00569 96986
DomainStartEndBit scoreE-value
ZZ75242.51.6e-09
Myb_DNA-binding6811444.34.7e-10
SWIRM44753351.82.7e-12

Sequences