Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AC205255.3_FGP036

Identification

Species:
Zea mays
Gene model
AC205255.3_FGP036
Family
PLATZ

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

889557 Score: 1

Oryza sativa subsp. japonica

LOC_Os06g41930.1 Score: 1
LOC_Os06g41930.2 Score: 1
LOC_Os06g41930.3 Score: 0.948
LOC_Os06g41930.4 Score: 0.948

Populus trichocarpa

831731 Score: 1
710669 Score: 0.936

Sorghum bicolor

130649 Score: 1

Expression data

Expressed Sequence Tags

At.21086
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX816755
Hv.2565
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf110d04, mRNA sequence /gb=AK251313
Os.14686
Oryza sativa Japonica Group cDNA clone:J023008F14, full insert sequence /cds=p(235,984) /gb=AK069139
Os.18638
Oryza sativa Japonica Group cDNA clone:J013092A21, full insert sequence /cds=p(94,867) /gb=AK066953
Os.24117
Oryza sativa Japonica Group cDNA clone:J013030D23, full insert sequence /cds=p(216,977) /gb=AK065620
Pba.880
WS02520.B21_M16 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02520_M16 3', mRNA sequence /clone=WS02520_M16 /clone_end=3' /gb=DT482790
Pth.880
WS02518.B21_F22 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02518_F22 3', mRNA sequence /clone=WS02518_F22 /clone_end=3' /gb=CV243262
Ptp.4911
R014G05 Populus root cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU884730
Ptp.6002
N068G12 Populus bark cDNA library Populus tremula x Populus tremuloides cDNA clone N068G12 5', mRNA sequence /clone=N068G12 /clone_end=5' /gb=CK110608
Sbi.12288
ANR1_15_C02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_15_C02_A002 5', mRNA sequence /clone=ANR1_15_C02_A002 /clone_end=5' /gb=CX609916 /gi=57808636
Sbi.1612
HS1_1_E11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_1_E11_A012 5', mRNA sequence /clone=HS1_1_E11_A012 /clone_end=5' /gb=CD203724 /gi=30932042
Sbi.18732
ANR1_1_C01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_1_C01_A002 5', mRNA sequence /clone=ANR1_1_C01_A002 /clone_end=5' /gb=CX606173 /gi=57803404

Domain Architecture

PLATZ PF04640 AC205255.3_FGP036
DomainStartEndBit scoreE-value
PLATZ351452391.2e-68

Sequences