Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT1G02580.1

Identification

Species:
Arabidopsis thaliana
Locus
AT1G02580
Gene model
AT1G02580.1
Gene names and synonyms
EMB173 iHOP
FIS1 iHOP
MEA iHOP
Description
MEA (MEDEA); transcription factor
Family
SET
3D structure (top 5)
2R3A 1H3I 3F9X 2RFI 1ML9
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

470218 Score: 1

Expression data

Expressed Sequence Tags

At.10786
Arabidopsis thaliana MEDEA (MEA) mRNA, complete cds /cds=p(14,2083) /gb=AF060485
At.3858
Arabidopsis thaliana EZA1 (SWINGER); transcription factor (EZA1) mRNA, complete cds /cds=p(94,2664) /gb=NM_116433
Pba.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Pth.4886
WS02532.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02532_C20 3', mRNA sequence /clone=WS02532_C20 /clone_end=3' /gb=DT486876
Pth.5102
WS0256.B21_F07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0256_F07 3', mRNA sequence /clone=WS0256_F07 /clone_end=3' /gb=CV245041
Sbi.7196
POL1_41_A10.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_41_A10_A002 5', mRNA sequence /clone=POL1_41_A10_A002 /clone_end=5' /gb=CF487051 /gi=34515920

Domain Architecture

SET PF00856 AT1G02580.1
DomainStartEndBit scoreE-value
SET538665172.41.2e-48

Sequences