Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT1G06850.2

Identification

Species:
Arabidopsis thaliana
Locus
AT1G06850
Gene model
AT1G06850.2
Gene names and synonyms
ATBZIP52 iHOP
Description
ATBZIP52 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 52); DNA binding
Family
bZIP
3D structure (top 5)
1HJB 1T2K 1GD2 1A02 1CI6
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.27060
Arabidopsis thaliana ATBZIP52 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 52); DNA binding / transcription factor (ATBZIP52) mRNA, complete cds /cds=p(186,1199) /gb=NM_100562
At.2835
Arabidopsis thaliana bZIP protein (AT4G38900) mRNA, complete cds /cds=p(354,1997) /gb=NM_179189
At.503
Arabidopsis thaliana bZIP transcription factor family protein (AT2G40620) mRNA, complete cds /cds=p(107,1210) /gb=NM_129624
Hv.30815
BJ462913 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags24o09 5', mRNA sequence /clone=bags24o09 /clone_end=5' /gb=BJ462913
Mtr.2023
Medicago truncatula clone MTYFL_FM_FN_FO1G-O-20 unknown mRNA /cds=p(140,862) /gb=BT053041
Os.15927
Oryza sativa (japonica cultivar-group) Os08g0543900 (Os08g0543900) mRNA, complete cds /cds=p(1,1374) /gb=NM_001068938
Os.18178
Oryza sativa (japonica cultivar-group) Os03g0127500 (Os03g0127500) mRNA, complete cds /cds=p(1,1281) /gb=NM_001055367
Os.19640
Oryza sativa Japonica Group cDNA clone:J013048G15, full insert sequence /gb=AK065995
Os.26538
Oryza sativa Japonica Group cDNA clone:J023052D02, full insert sequence /cds=p(93,1082) /gb=AK070466
Os.54213
Oryza sativa Japonica Group cDNA clone:J033097I23, full insert sequence /gb=AK102562
Pba.4670
WS01228.B21_D10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01228_D10 3', mRNA sequence /clone=WS01228_D10 /clone_end=3' /gb=DT476077
Ppa.14974
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_201072) mRNA, complete cds /cds=p(1,1050) /gb=XM_001785687
Ppa.19317
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_45185) mRNA, partial cds /cds=p(1,798) /gb=XM_001755929
Ppa.8082
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_176895) mRNA, complete cds /cds=p(1,1002) /gb=XM_001755930
Pth.4670
Populus trichocarpa clone WS0128_N17 unknown mRNA /cds=p(111,1133) /gb=EF148222
Ptp.7832
T088C10.5pR Populus shoot meristem cDNA library Populus tremula x Populus tremuloides cDNA clone T088C10 5', mRNA sequence /clone=T088C10 /clone_end=5' /gb=DN499804
Ptp.954
C028P47.5pR Populus strain T89 leaves Populus tremula x Populus tremuloides cDNA clone C028P47 5', mRNA sequence /clone=C028P47 /clone_end=5' /gb=CK100390
Sbi.19770
RTHAIR1_1_D03.g1_A002 Sorghum bicolor BTx623 Root hair Sorghum bicolor cDNA clone RTHAIR1_1_D03_A002 5', mRNA sequence /clone=RTHAIR1_1_D03_A002 /clone_end=5' /gb=EH406629

Domain Architecture

bZIP_1 PF00170 AT1G06850.2
DomainStartEndBit scoreE-value
bZIP_114620931.72.7e-06
bZIP_214620031.72.8e-06

Sequences