Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT1G09060.2

Identification

Species:
Arabidopsis thaliana
Locus
AT1G09060
Gene model
AT1G09060.2
Description
transcription factor jumonji (jmjC) domain-containing protein
Family
Jumonji

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

470987 Score: 1

Arabidopsis thaliana

AT1G09060.1 Score: 1
AT1G09060.2 Score: 1
AT1G09060.3 Score: 1

Arabidopsis thaliana

AT1G09060.1 Score: 1
AT1G09060.2 Score: 1
AT1G09060.3 Score: 1

Carica papaya

evm.TU.supercontig_48.75 Score: 1

Arabidopsis thaliana

AT1G09060.1 Score: 1
AT1G09060.2 Score: 1
AT1G09060.3 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g22540.1 Score: 1

Populus trichocarpa

570810 Score: 1

Arabidopsis thaliana

AT1G09060.1 Score: 1
AT1G09060.2 Score: 1
AT1G09060.3 Score: 1

Sorghum bicolor

5049432 Score: 1

Arabidopsis thaliana

AT1G09060.3 Score: 1
AT1G09060.1 Score: 0.977
AT1G09060.2 Score: 0.977

Arabidopsis thaliana

AT1G09060.3 Score: 1
AT1G09060.1 Score: 0.97
AT1G09060.2 Score: 0.97

Vitis vinifera

GSVIVP00022742001 Score: 1

Expression data

Expressed Sequence Tags

At.10382
Arabidopsis thaliana mRNA for GF14 Kappa isoform, complete cds, clone: RAFL14-53-N23 /cds=p(62,802) /gb=AK228019
Pba.1590
WS02514.B21.1_A09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02514_A09 3', mRNA sequence /clone=WS02514_A09 /clone_end=3' /gb=CV242061
Pth.1590
WS02514.B21.1_A09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02514_A09 3', mRNA sequence /clone=WS02514_A09 /clone_end=3' /gb=CV242061
Vvi.2997
CA12EI302IF_E11 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI302IF_E11 5', mRNA sequence /clone=CA12EI302IF_E11 /clone_end=5' /gb=CA816066

Domain Architecture

WRC PF08879 AT1G09060.2
DomainStartEndBit scoreE-value
WRC246979.61e-20
JmjC738842-1.40.00091

Sequences