Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT1G16070.1

Identification

Species:
Arabidopsis thaliana
Locus
AT1G16070
Gene model
AT1G16070.1
Gene names and synonyms
AtTLP8 iHOP
Description
AtTLP8 (TUBBY LIKE PROTEIN 8); transcription factor
Family
TUB
3D structure (top 5)
2FIM 3C5N
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

471808 Score: 1

Arabidopsis thaliana

AT1G16070.1 Score: 1
AT1G16070.2 Score: 0.988

Oryza sativa subsp. japonica

LOC_Os02g08310.1 Score: 1

Populus trichocarpa

178195 Score: 1

Arabidopsis thaliana

AT1G16070.1 Score: 1
AT1G16070.2 Score: 0.986

Sorghum bicolor

4000312 Score: 1

Arabidopsis thaliana

AT1G16070.1 Score: 1
AT1G16070.2 Score: 0.988

Selaginella moellendorffii

33752 Score: 1

Arabidopsis thaliana

AT1G16070.1 Score: 1
AT1G16070.2 Score: 0.99

Arabidopsis thaliana

AT1G16070.1 Score: 1
AT1G16070.2 Score: 0.989

Zea mays

GRMZM2G136820_P01 Score: 1
GRMZM2G170739_P01 Score: 1

Expression data

Expressed Sequence Tags

At.41903
Arabidopsis thaliana AtTLP8 (TUBBY LIKE PROTEIN 8) (AtTLP8) mRNA, complete cds /cds=p(118,1314) /gb=NM_001035976

Domain Architecture

Tub PF01167 AT1G16070.1
DomainStartEndBit scoreE-value
Tub150390-24.51.5e-08

Sequences