Plant Transcription factor database - Universität Potsdam

version: 3.0

Gene model: AT1G17770.1

Identification

Species: Arabidopsis thaliana Locus AT1G17770 Gene model AT1G17770.1 Gene names and synonyms SUVH7 iHOP Description SUVH7 (SU(VAR)3-9 HOMOLOG 7); histone-lysine N-methyltransferase/ zinc ion binding Family SET 3D structure (top 5) 2RFI 1MVH 3FDE 2W5Y 3H6L
	PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

Ortholog identification by INPARANOID

Arabidopsis lyrata

312743 Score: 1

Expression data

Expressed Sequence Tags

At.15818: Arabidopsis thaliana SUVH7 (SUVH7) mRNA, complete cds /cds=p(1,2082) /gb=AF344450
At.66241: Arabidopsis thaliana SDG21 (SET DOMAIN GROUP 21) (SDG21) mRNA, complete cds /cds=p(1,2268) /gb=NM_128034
Vvi.14480: WIN1127.C21_D07 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1127_D07 3', mRNA sequence /clone=WIN1127_D07 /clone_end=3' /gb=EC986263

Domain Architecture

AT1G17770.1

Domain	Start	End	Bit score	E-value
AT_hook	129	141	14.2	0.085
YDG_SRA	222	377	149.3	1.1e-41
Pre-SET	406	511	150.2	5.7e-42
SET	513	666	181.1	2.8e-51

Sequences

protein sequence
transcript sequence