Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT1G45249.1

Identification

Species:
Arabidopsis thaliana
Locus
AT1G45249
Gene model
AT1G45249.1
Gene names and synonyms
ABF2 iHOP
AREB1 iHOP
Description
ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2)
Family
bZIP
3D structure (top 5)
1HJB 1T2K 1FOS 1GU4 1DH3
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

473850 Score: 1

Populus trichocarpa

551849 Score: 1

Vitis vinifera

GSVIVP00014828001 Score: 1

Expression data

Expressed Sequence Tags

At.48130
Arabidopsis thaliana ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2) (ABF2) mRNA, complete cds /cds=p(131,1381) /gb=NM_179446
Hv.21574
Hordeum vulgare subsp. vulgare bZIP transcription factor ABI5 (ABI5) mRNA, complete cds /cds=p(23,1084) /gb=AY150676
Mtr.22269
Medicago truncatula clone MTYFD_FE_FF_FG1G-F-15 unknown mRNA /cds=p(73,531) /gb=BT052661
Mtr.8268
MTYEX19TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV262556
Os.11781
Oryza sativa Japonica Group cDNA clone:J013109E06, full insert sequence /cds=p(218,1291) /gb=AK072062
Os.4379
Oryza sativa (japonica cultivar-group) bZIP transcription factor (aba1) mRNA, complete cds /cds=p(94,1050) /gb=AY323482
Os.54299
Oryza sativa Japonica Group cDNA clone:J033121M03, full insert sequence /cds=p(205,1179) /gb=AK103188
Os.97858
Oryza sativa Japonica Group cDNA clone:J013049N23, full insert sequence /cds=p(75,1205) /gb=AK065873
Pba.7155
WS02534.B21_A12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02534_A12 3', mRNA sequence /clone=WS02534_A12 /clone_end=3' /gb=DT487561
Pth.7155
WS02534.B21_A12 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02534_A12 3', mRNA sequence /clone=WS02534_A12 /clone_end=3' /gb=DT487561
Vvi.21937
C1G02732 Mixture of buds, little clusters and fruits (C1) Vitis vinifera cDNA clone C1G02732, mRNA sequence /clone=C1G02732 /gb=EE062510
Vvi.86
Vitis vinifera mRNA for putative ripening-related bZIP protein (grip55 gene) /cds=p(136,1479) /gb=AJ237992
Vvi.9592
VV_PEa23e08.b1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence /gb=EV231860

Domain Architecture

bZIP_1 PF00170 AT1G45249.1
DomainStartEndBit scoreE-value
bZIP_133439745.61.7e-10
bZIP_233439140.94.4e-09

Sequences