Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT1G50640.1

Identification

Species:
Arabidopsis thaliana
Locus
AT1G50640
Gene model
AT1G50640.1
Gene names and synonyms
ATERF3 iHOP
ERF3 iHOP
Description
ATERF3/ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription repressor
Family
AP2-EREBP
3D structure (top 5)
1GCC
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

474196 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g09650.1 Score: 1

Populus trichocarpa

707534 Score: 1

Sorghum bicolor

148527 Score: 1

Vitis vinifera

GSVIVP00025959001 Score: 1

Zea mays

GRMZM2G079653_P01 Score: 1

Expression data

Expressed Sequence Tags

At.1645
Arabidopsis thaliana ATERF3/ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3); DNA binding / protein binding / transcription factor/ transcriptio> (ATERF3/ERF3) mRNA, complete cds /cds=p(155,832) /gb=NM_103946
At.20161
Arabidopsis thaliana AT3g20310/MQC12_6 mRNA, complete cds /cds=p(115,849) /gb=AY037254
At.47623
EST00541 Arabidopsis Chronic Ozone Forward-Subtracted Library Arabidopsis thaliana cDNA clone AtCOzIE8 similar to ethylene responsive element binding factor-3, mRNA sequence /clone=AtCOzIE8 /gb=BE662797
At.71718
Arabidopsis thaliana mRNA for ethylene responsive element binding factor 3, complete cds, clone: RAFL14-57-I12 /cds=p(283,690) /gb=AK228091
Mtr.18217
METAJ09TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY475687
Pth.13327
Populus trichocarpa clone WS01214_L17 unknown mRNA /cds=p(160,819) /gb=EF146837
Vvi.2178
VV_PEd07f10.b1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV242753
Vvi.7125
WIN0554.C21_M09 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0554_M09 3', mRNA sequence /clone=WIN0554_M09 /clone_end=3' /gb=EC952142

Domain Architecture

AP2 PF00847 AT1G50640.1
DomainStartEndBit scoreE-value
AP2267777.64e-20

Sequences