Gene model: AT1G56170.1

Species: Arabidopsis thaliana Locus AT1G56170 Gene model AT1G56170.1 Gene names and synonyms ATHAP5B iHOP HAP5B iHOP Description HAP5B (Heme activator protein (yeast) homolog 5B); DNA binding / transcription factor Family CCAAT 3D structure (top 5) 1JFI 1N1J 2BYK 1B67 1F1E
	PDB entry: 1JFI 1N1J 2BYK 1B67 1F1E 1KU5 2HUE 1Q9C 1TZY 1ID3 2F8N 2JSS 2NQB

• KEGG
• TAIR

• GabiPD
• PhosPhAT
• ProMEX

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

474686 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Cyanidioschyzon merolae

CMK073C Score: 1

Coccomyxa sp. C-169

43586 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Micromonas sp. RCC299

62865 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Ostreococcus lucimarinus

7962 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g07450.1 Score: 1
LOC_Os02g07450.2 Score: 1

Ostreococcus tauri

24219 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Physcomitrella patens

8911 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Populus trichocarpa

558718 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Sorghum bicolor

4003709 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Selaginella moellendorffii

58662 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Vitis vinifera

GSVIVP00002065001 Score: 1

Arabidopsis thaliana

AT1G56170.1 Score: 1
AT1G56170.2 Score: 1

Zea mays

GRMZM2G124421_P01 Score: 1

• AthaMap - TFBS in the promoter of this gene
• eFP Browser - Uni Toronto - Natural Variation
• MPSS data
• eFP Browser - Uni Toronto - Abiotic stresses
• eFP Browser - Uni Toronto - Developmental processes
• NCBI EST Profile Viewer (UniGene: At.10845)
• NCBI EST Profile Viewer (UniGene: At.22258)
• NCBI EST Profile Viewer (UniGene: At.25413)
• NCBI EST Profile Viewer (UniGene: At.28997)
• NCBI EST Profile Viewer (UniGene: At.69059)
• NCBI EST Profile Viewer (UniGene: Mtr.15152)
• NCBI EST Profile Viewer (UniGene: Mtr.5410)
• NCBI EST Profile Viewer (UniGene: Os.10876)
• NCBI EST Profile Viewer (UniGene: Os.24566)
• NCBI EST Profile Viewer (UniGene: Pba.10716)
• NCBI EST Profile Viewer (UniGene: Pba.1266)
• NCBI EST Profile Viewer (UniGene: Pba.8668)
• NCBI EST Profile Viewer (UniGene: Pba.8955)
• NCBI EST Profile Viewer (UniGene: Pth.1266)
• NCBI EST Profile Viewer (UniGene: Pth.172)
• NCBI EST Profile Viewer (UniGene: Pth.8668)
• NCBI EST Profile Viewer (UniGene: Vvi.1103)
• NCBI EST Profile Viewer (UniGene: Vvi.12631)
• NCBI EST Profile Viewer (UniGene: Vvi.19448)
• NCBI EST Profile Viewer (UniGene: Vvi.23215)

At.10845

Arabidopsis thaliana CCAAT-box binding transcription factor Hap5a, putative (AT1G54830) mRNA, complete cds /cds=p(469,1122) /gb=NM_202301

At.22258

Arabidopsis thaliana HAP5C (HEME ACTIVATED PROTEIN 5C); DNA binding (HAP5C) mRNA, complete cds /cds=p(602,1297) /gb=NM_202068

At.25413

Arabidopsis thaliana HAP5B (Heme activator protein (yeast) homolog 5B) (HAP5B) mRNA, complete cds /cds=p(233,832) /gb=NM_001084257

At.28997

Arabidopsis thaliana CCAAT-box binding transcription factor Hap5a, putative (AT5G63470) mRNA, complete cds /cds=p(15,767) /gb=NM_125742

At.69059

AYAVU59TF pooled cDNA populations Arabidopsis thaliana cDNA, mRNA sequence /gb=EG462564

Mtr.15152

EST640470 MTUS Medicago truncatula cDNA clone MTUS-57G7, mRNA sequence /clone=MTUS-57G7 /gb=CA922752

Mtr.5410

Medicago truncatula clone MTYF5_F6_F7_F81G-P-7 unknown mRNA /cds=p(110,880) /gb=BT051793

Os.10876

Oryza sativa Japonica Group cDNA, clone: J100067L16, full insert sequence /cds=p(191,970) /gb=AK243429

Os.24566

Oryza sativa Japonica Group cDNA clone:001-045-H09, full insert sequence /gb=AK105079

Pba.10716

WS01226.BR.1_F03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01226_F03 5', mRNA sequence /clone=WS01226_F03 /clone_end=5' /gb=DT472391

Pba.1266

WS02538.B21_P11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02538_P11 3', mRNA sequence /clone=WS02538_P11 /clone_end=3' /gb=DT489341

Pba.8668

WS02524.B21_D03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02524_D03 3', mRNA sequence /clone=WS02524_D03 /clone_end=3' /gb=DT484009

Pba.8955

WS02522.B21_A10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02522_A10 3', mRNA sequence /clone=WS02522_A10 /clone_end=3' /gb=DT483231

Pth.1266

WS02538.B21_P11 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02538_P11 3', mRNA sequence /clone=WS02538_P11 /clone_end=3' /gb=DT489341

Pth.172

Populus trichocarpa clone WS01226_F03 unknown mRNA /cds=p(56,763) /gb=EF147023

Pth.8668

WS02524.B21_D03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02524_D03 3', mRNA sequence /clone=WS02524_D03 /clone_end=3' /gb=DT484009

Vvi.1103

WIN063.C21_G22 Cab Sauv seed normalized (WIN06) Vitis vinifera cDNA clone WIN063_G22 3', mRNA sequence /clone=WIN063_G22 /clone_end=3' /gb=EC957694

Vvi.12631

WIN055.C21_J16 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN055_J16 3', mRNA sequence /clone=WIN055_J16 /clone_end=3' /gb=EC938104

Vvi.19448

WIN0520.C21_I06 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0520_I06 3', mRNA sequence /clone=WIN0520_I06 /clone_end=3' /gb=EC940706

Vvi.23215

VVI179H05_611788 CabSau Flower Stage 12 (FLOu0012) Vitis vinifera cDNA clone VVI179H05 5, mRNA sequence /clone=VVI179H05 /clone_end=5' /gb=DV220063

protein sequence
transcript sequence