Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT1G63490.1

Identification

Species:
Arabidopsis thaliana
Locus
AT1G63490
Gene model
AT1G63490.1
Description
transcription factor jumonji (jmjC) domain-containing protein
Family
Jumonji
3D structure (top 5)
2OX0 2W2I 1WEP 2RI7
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

893094 Score: 1

Ostreococcus lucimarinus

17878 Score: 1
19230 Score: 1

Ostreococcus tauri

36253 Score: 1

Populus trichocarpa

413516 Score: 1

Sorghum bicolor

4865548 Score: 1

Zea mays

GRMZM2G165452_P01 Score: 1

Expression data

Expressed Sequence Tags

At.22811
Arabidopsis thaliana transcription factor jumonji (jmjC) domain-containing protein (AT1G63490) mRNA, complete cds /cds=p(85,3435) /gb=NM_105028

Domain Architecture

JmjC PF02373 AT1G63490.1
DomainStartEndBit scoreE-value
JmjC66182225.99.5e-65
zf-C5HC227632999.11.4e-26
PLU-1375791-21.11.3e-07
PHD1009105329.15.2e-06

Sequences