Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT1G79180.1

Identification

Species:
Arabidopsis thaliana
Locus
AT1G79180
Gene model
AT1G79180.1
Gene names and synonyms
AtMYB63 iHOP
Description
AtMYB63 (myb domain protein 63); DNA binding / transcription factor
Family
MYB
3D structure (top 5)
2K9N 1GV2 1H89 1H8A 2JUH
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

477086 Score: 1

Zea mays

GRMZM2G039557_P01 Score: 1

Expression data

Expressed Sequence Tags

At.10900
53-L021131-065-005-E07-SeLB MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 005-E07, mRNA sequence /clone=005-E07 /gb=DR750471
At.10915
Arabidopsis thaliana AtMYB63 (myb domain protein 63); DNA binding / transcription factor (AtMYB63) mRNA, complete cds /cds=p(15,899) /gb=NM_106569
At.10919
Arabidopsis thaliana AtMYB72/MYB72 (myb domain protein 72); DNA binding / transcription factor (AtMYB72/MYB72) mRNA, complete cds /cds=p(1,891) /gb=NM_104495
At.11321
Arabidopsis thaliana clone 152630 mRNA, complete sequence /cds=p(163,981) /gb=AY085461
At.42352
Arabidopsis thaliana ATMYB13 (myb domain protein 13); DNA binding / transcription factor (ATMYB13) mRNA, complete cds /cds=p(103,843) /gb=NM_100499
At.5681
Arabidopsis thaliana AtMYB10 (myb domain protein 10); DNA binding / transcription factor (AtMYB10) mRNA, complete cds /cds=p(1,720) /gb=NM_112118
At.9932
Arabidopsis thaliana AtMYB9 (myb domain protein 9); DNA binding (AtMYB9) mRNA, complete cds /cds=p(326,1336) /gb=NM_203063
Hv.26842
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf97l09, mRNA sequence /gb=AK248579
Hv.4463
HC114B11_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone HC114B11_SK.ab1 similar to myb protein homolog - rice gi|1946265|emb|CAA72217.1| (Y11414) myb [Oryza sativa], mRNA sequence /clone=HC114B11_SK.ab1 /gb=BM816803
Mtr.15864
Medicago truncatula clone MTYF9_FA_FB_FC1G-B-23 unknown mRNA /cds=p(109,885) /gb=BT052266
Mtr.4790
EST1227002 MTY Medicago truncatula cDNA clone MTYB151, mRNA sequence /clone=MTYB151 /gb=DW018041
Mtr.9245
Medicago truncatula clone MTYF5_F6_F7_F81G-A-23 unknown mRNA /cds=p(83,850) /gb=BT051911
Os.10172
CT857440 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa (indica cultivar-group) cDNA clone OSIGCRN106M14, mRNA sequence /clone=OSIGCRN106M14 /gb=CT857440
Os.3387
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107G14, full insert sequence /gb=CT834744
Os.47854
Oryza sativa Japonica Group cDNA clone:J023030I19, full insert sequence /gb=AK111720
Os.80488
Oryza sativa (japonica cultivar-group) Os08g0486300 (Os08g0486300) mRNA, complete cds /cds=p(1,1074) /gb=NM_001068630
Os.84391
Oryza sativa Japonica Group cDNA clone:001-031-D02, full insert sequence /gb=AK111960
Pth.11166
Populus trichocarpa clone WS01231_B05 unknown mRNA /cds=p(113,1009) /gb=EF147441
Sbi.3364
WOUND1_65_D11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_65_D11_A002 5', mRNA sequence /clone=WOUND1_65_D11_A002 /clone_end=5' /gb=CN149909 /gi=45991895

Domain Architecture

Myb_DNA-binding PF00249 AT1G79180.1
DomainStartEndBit scoreE-value
Myb_DNA-binding166352.91.1e-12
Myb_DNA-binding6911444.92.8e-10

Sequences