Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT2G17870.1

Identification

Species:
Arabidopsis thaliana
Locus
AT2G17870
Gene model
AT2G17870.1
Description
cold-shock DNA-binding family protein
Family
CSD
3D structure (top 5)
1H95 1MJC 2KCM 3CAM 2BH8
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

480687 Score: 1

Carica papaya

evm.TU.supercontig_6.256 Score: 1

Vitis vinifera

GSVIVP00015337001 Score: 1

Zea mays

GRMZM2G176223_P01 Score: 1

Expression data

Expressed Sequence Tags

At.19464
Arabidopsis thaliana cold-shock DNA-binding family protein (AT2G17870) mRNA, complete cds /cds=p(50,955) /gb=NM_127341
At.23073
Arabidopsis thaliana mRNA for glycine-rich protein, complete cds, clone: RAFL07-95-D17 /cds=p(60,959) /gb=AK226815

Domain Architecture

CSD PF00313 AT2G17870.1
DomainStartEndBit scoreE-value
CSD1077113.94.9e-31
zf-CCHC9411132.21.8e-06
zf-CCHC13014730.17.9e-06
zf-CCHC16117831.72.7e-06
zf-CCHC19621330.94.7e-06
zf-CCHC22424128.52.4e-05
zf-CCHC25226930.37.2e-06
zf-CCHC28229936.31.1e-07

Sequences