Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT2G24740.1

Identification

Species:
Arabidopsis thaliana
Locus
AT2G24740
Gene model
AT2G24740.1
Gene names and synonyms
SDG21 iHOP
SUVH8 iHOP
Description
SDG21 (SET DOMAIN GROUP 21)
Family
SET
3D structure (top 5)
2F69 2PB7 2R3A 1ML9 3F9X
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.11687
Arabidopsis thaliana SUVH3 (SU(VAR)3-9 HOMOLOG 3) (SUVH3) mRNA, complete cds /cds=p(212,2221) /gb=NM_105968
At.15818
Arabidopsis thaliana SUVH7 (SUVH7) mRNA, complete cds /cds=p(1,2082) /gb=AF344450
At.66241
Arabidopsis thaliana SDG21 (SET DOMAIN GROUP 21) (SDG21) mRNA, complete cds /cds=p(1,2268) /gb=NM_128034

Domain Architecture

AT_hook PF02178 AT2G24740.1
DomainStartEndBit scoreE-value
AT_hook17418611.60.24
YDG_SRA305452158.81.5e-44
Pre-SET481573111.42.8e-30
SET5757291674.9e-47

Sequences