Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT2G27300.1

Identification

Species:
Arabidopsis thaliana
Locus
AT2G27300
Gene model
AT2G27300.1
Gene names and synonyms
ANAC040 iHOP
NTL8 iHOP
Description
ANAC040/NTL8 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 40); transcription factor
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481629 Score: 1

Populus trichocarpa

199890 Score: 1

Vitis vinifera

GSVIVP00037297001 Score: 1

Expression data

Expressed Sequence Tags

At.22852
Arabidopsis thaliana NAC2 (Arabidopsis NAC domain containing protein 78); transcription factor (NAC2) mRNA, complete cds /cds=p(223,1926) /gb=NM_120523
At.36167
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX823820
At.40004
Arabidopsis thaliana ANAC014 (ANAC014) mRNA, complete cds /cds=p(29,1987) /gb=NM_202225
At.52935
Arabidopsis thaliana ANAC040/NTL8 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 40); transcription factor (ANAC040/NTL8) mRNA, complete cds /cds=p(1,1008) /gb=NM_128289
Hv.23644
Hordeum vulgare subsp. vulgare mRNA for transcription factor, complete cds /cds=p(11,1306) /gb=AB362161
Hv.5295
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf28m08, mRNA sequence /gb=AK249396
Os.83155
Oryza sativa Japonica Group RIM1 mRNA for NAC protein, complete cds /cds=p(1,1953) /gb=AB265821
Os.93257
Oryza sativa Japonica Group cDNA clone:J013131L02, full insert sequence /gb=AK068153
Os.9354
Oryza sativa Japonica Group cDNA clone:J023008J18, full insert sequence /cds=p(84,2054) /gb=AK120773
Pth.11862
F111P59.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F111P59 3', mRNA sequence /clone=F111P59 /clone_end=3' /gb=CK091605
Sbi.17975
OX1_38_A01.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_38_A01_A002 5', mRNA sequence /clone=OX1_38_A01_A002 /clone_end=5' /gb=CN135689 /gi=45968055

Domain Architecture

NAM PF02365 AT2G27300.1
DomainStartEndBit scoreE-value
NAM141412321.4e-66

Sequences