Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT2G28450.1

Identification

Species:
Arabidopsis thaliana
Locus
AT2G28450
Gene model
AT2G28450.1
Description
zinc finger (CCCH-type) family protein
Family
C3H
3D structure (top 5)
1U2Z 2JJQ 1UWV 3BT7 1WXX
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

868960 Score: 1

Carica papaya

evm.TU.supercontig_898.5 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g01480.1 Score: 1

Physcomitrella patens

138354 Score: 1

Populus trichocarpa

833322 Score: 1

Sorghum bicolor

5056910 Score: 1

Vitis vinifera

GSVIVP00024526001 Score: 1

Zea mays

GRMZM2G147623_P02 Score: 1

Expression data

Expressed Sequence Tags

At.44990
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT2G28450) mRNA, complete cds /cds=p(134,2563) /gb=NM_128405
Os.50217
Oryza sativa Japonica Group cDNA clone:J013030B09, full insert sequence /gb=AK120156
Ppa.5648
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_138354) mRNA, complete cds /cds=p(1,2295) /gb=XM_001772018

Domain Architecture

zf-CCCH PF00642 AT2G28450.1
DomainStartEndBit scoreE-value
zf-CCCH8010639.31.3e-08

Sequences