Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT2G34880.1

Identification

Species:
Arabidopsis thaliana
Locus
AT2G34880
Gene model
AT2G34880.1
Gene names and synonyms
MEE27 iHOP
Description
MEE27 (maternal effect embryo arrest 27); transcription factor
Family
Jumonji
3D structure (top 5)
2OX0 2W2I
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

869817 Score: 1

Expression data

Expressed Sequence Tags

At.26858
Arabidopsis thaliana transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (AT1G08620) mRNA, complete cds /cds=p(1,3552) /gb=NM_100735
At.27326
Arabidopsis thaliana transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (AT1G30810) mRNA, complete cds /cds=p(323,2686) /gb=NM_102818
At.43482
Arabidopsis thaliana transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (AT4G20400) mRNA, complete cds /cds=p(201,3065) /gb=NM_118159
At.53035
Arabidopsis thaliana MEE27 (maternal effect embryo arrest 27); transcription factor (MEE27) mRNA, complete cds /cds=p(1,2421) /gb=NM_129041
Hv.16169
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf124d14, mRNA sequence /gb=AK253132
Os.10868
Oryza sativa Japonica Group cDNA clone:J023127H13, full insert sequence /cds=p(200,3916) /gb=AK121381
Pth.16132
F057P19.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F057P19 3', mRNA sequence /clone=F057P19 /clone_end=3' /gb=CK091187

Domain Architecture

JmjN PF02375 AT2G34880.1
DomainStartEndBit scoreE-value
JmjN62106103.65.9e-28
JmjC294410250.24.6e-72
zf-C5HC251456775.32e-19
FYRN63768677.63.9e-20
FYRC689780130.74.2e-36

Sequences