Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT2G35940.1

Identification

Species:
Arabidopsis thaliana
Locus
AT2G35940
Gene model
AT2G35940.1
Gene names and synonyms
BLH1 iHOP
EDA29 iHOP
Description
BLH1 (embryo sac development arrest 29); DNA binding / transcription factor
Family
HB
3D structure (top 5)
2DMN 1DU6 1PUF 1B72 1X2N
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

482564 Score: 1

Arabidopsis thaliana

AT2G35940.1 Score: 1
AT2G35940.2 Score: 1
AT2G35940.3 Score: 1

Arabidopsis thaliana

AT2G35940.1 Score: 1
AT2G35940.2 Score: 1
AT2G35940.3 Score: 1

Carica papaya

evm.TU.supercontig_104.22 Score: 1

Arabidopsis thaliana

AT2G35940.1 Score: 1
AT2G35940.2 Score: 1
AT2G35940.3 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g06020.1 Score: 1

Populus trichocarpa

256272 Score: 1

Arabidopsis thaliana

AT2G35940.1 Score: 1
AT2G35940.2 Score: 1
AT2G35940.3 Score: 1

Sorghum bicolor

5056382 Score: 1

Arabidopsis thaliana

AT2G35940.1 Score: 1
AT2G35940.2 Score: 1
AT2G35940.3 Score: 1

Arabidopsis thaliana

AT2G35940.1 Score: 1
AT2G35940.2 Score: 1
AT2G35940.3 Score: 1

Vitis vinifera

GSVIVP00038902001 Score: 1

Arabidopsis thaliana

AT2G35940.1 Score: 1
AT2G35940.2 Score: 1
AT2G35940.3 Score: 1

Zea mays

GRMZM2G158350_P01 Score: 1
GRMZM2G158350_P02 Score: 1
GRMZM2G158350_P03 Score: 1
GRMZM2G158350_P04 Score: 1
GRMZM2G158350_P05 Score: 1
GRMZM2G158350_P06 Score: 1

Expression data

Expressed Sequence Tags

At.23033
Arabidopsis thaliana BLH1 (embryo sac development arrest 29) (BLH1) mRNA, complete cds /cds=p(544,2586) /gb=NM_001036413
At.67975
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-92-K10 /cds=p(1,354) /gb=AK221821
At.74048
Arabidopsis thaliana BLH7 (BELL1-LIKE HOMEODOMAIN 7); DNA binding / transcription factor (BLH7) mRNA, complete cds /cds=p(548,1996) /gb=NM_127194
Mtr.13534
NF004E06ST1F1000 Developing stem Medicago truncatula cDNA clone NF004E06ST 5', mRNA sequence /clone=NF004E06ST /clone_end=5' /gb=AW688195
Mtr.22349
META209TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY474128
Os.11805
Oryza sativa (japonica cultivar-group) Os11g0158600 (Os11g0158600) mRNA, complete cds /cds=p(1,1278) /gb=NM_001072340
Os.21068
Oryza sativa Japonica Group cDNA clone:J013104D06, full insert sequence /gb=AK099829
Os.27062
Oryza sativa Japonica Group cDNA, clone: J043023B19, full insert sequence /gb=AK287476
Sbi.1439
WOUND1_26_C01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_26_C01_A002 5', mRNA sequence /clone=WOUND1_26_C01_A002 /clone_end=5' /gb=CN145056 /gi=45983936
Vvi.6621
CAP0005_IF_G01 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0005_IF_G01 5', mRNA sequence /clone=CAP0005_IF_G01 /clone_end=5' /gb=CF517798

Domain Architecture

POX PF07526 AT2G35940.1
DomainStartEndBit scoreE-value
POX188333289.66.3e-84
Homeobox3874454.20.0042

Sequences