Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT2G40620.1

Identification

Species:
Arabidopsis thaliana
Locus
AT2G40620
Gene model
AT2G40620.1
Description
bZIP transcription factor family protein
Family
bZIP

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483119 Score: 1

Carica papaya

evm.TU.supercontig_19.65 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g21800.1 Score: 1
LOC_Os03g21800.2 Score: 1

Populus trichocarpa

242954 Score: 1

Sorghum bicolor

5052247 Score: 1

Vitis vinifera

GSVIVP00029442001 Score: 1

Zea mays

GRMZM2G062391_P01 Score: 1
GRMZM2G135987_P01 Score: 1

Expression data

Expressed Sequence Tags

At.27060
Arabidopsis thaliana ATBZIP52 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 52); DNA binding / transcription factor (ATBZIP52) mRNA, complete cds /cds=p(186,1199) /gb=NM_100562
At.2835
Arabidopsis thaliana bZIP protein (AT4G38900) mRNA, complete cds /cds=p(354,1997) /gb=NM_179189
At.503
Arabidopsis thaliana bZIP transcription factor family protein (AT2G40620) mRNA, complete cds /cds=p(107,1210) /gb=NM_129624
Hv.30815
BJ462913 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare subsp. vulgare cDNA clone bags24o09 5', mRNA sequence /clone=bags24o09 /clone_end=5' /gb=BJ462913
Mtr.2023
Medicago truncatula clone MTYFL_FM_FN_FO1G-O-20 unknown mRNA /cds=p(140,862) /gb=BT053041
Os.19640
Oryza sativa Japonica Group cDNA clone:J013048G15, full insert sequence /gb=AK065995
Os.26538
Oryza sativa Japonica Group cDNA clone:J023052D02, full insert sequence /cds=p(93,1082) /gb=AK070466
Os.54213
Oryza sativa Japonica Group cDNA clone:J033097I23, full insert sequence /gb=AK102562
Pba.4670
WS01228.B21_D10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01228_D10 3', mRNA sequence /clone=WS01228_D10 /clone_end=3' /gb=DT476077
Ppa.14974
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_201072) mRNA, complete cds /cds=p(1,1050) /gb=XM_001785687
Ppa.19317
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_45185) mRNA, partial cds /cds=p(1,798) /gb=XM_001755929
Sbi.19770
RTHAIR1_1_D03.g1_A002 Sorghum bicolor BTx623 Root hair Sorghum bicolor cDNA clone RTHAIR1_1_D03_A002 5', mRNA sequence /clone=RTHAIR1_1_D03_A002 /clone_end=5' /gb=EH406629
Vvi.20829
WIN0564.C21_O19 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0564_O19 3', mRNA sequence /clone=WIN0564_O19 /clone_end=3' /gb=EC955513
Vvi.22367
WIN0520.C21_G05 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0520_G05 3', mRNA sequence /clone=WIN0520_G05 /clone_end=3' /gb=EC940663

Domain Architecture

bZIP_1 PF00170 AT2G40620.1
DomainStartEndBit scoreE-value
bZIP_114620934.34.5e-07
bZIP_214620028.62.4e-05

Sequences