Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT2G44840.1

Identification

Species:
Arabidopsis thaliana
Locus
AT2G44840
Gene model
AT2G44840.1
Gene names and synonyms
ATERF13 iHOP
EREBP iHOP
Description
ATERF13/EREBP (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13); DNA binding / transcription factor
Family
AP2-EREBP
3D structure (top 5)
1GCC
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

903921 Score: 1

Populus trichocarpa

286557 Score: 1
414492 Score: 1

Vitis vinifera

GSVIVP00014229001 Score: 1

Expression data

Expressed Sequence Tags

At.29014
Arabidopsis thaliana ATERF13/EREBP (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13); DNA binding / transcription factor (ATERF13/EREBP) mRNA, complete cds /cds=p(100,780) /gb=NM_130048
Pba.7472
WS02530.BR_P10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_P10 5', mRNA sequence /clone=WS02530_P10 /clone_end=5' /gb=DT481118
Pth.7472
WS02530.BR_P10 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02530_P10 5', mRNA sequence /clone=WS02530_P10 /clone_end=5' /gb=DT481118
Vvi.12438
WIN0539.C21_O19 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0539_O19 3', mRNA sequence /clone=WIN0539_O19 /clone_end=3' /gb=EC946854

Domain Architecture

AP2 PF00847 AT2G44840.1
DomainStartEndBit scoreE-value
AP29014277.54.3e-20

Sequences