Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT2G46790.1

Identification

Species:
Arabidopsis thaliana
Locus
AT2G46790
Gene model
AT2G46790.1
Gene names and synonyms
APRR9 iHOP
PRR9 iHOP
TL1 iHOP
Description
APRR9 (PSEUDO-RESPONSE REGULATOR 9); transcription regulator
Family
Pseudo ARR-B
3D structure (top 5)
3DZD 1MB3 2QXY 2PL1 3HDG
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

483843 Score: 1

Chlamydomonas reinhardtii

166515 Score: 1

Arabidopsis thaliana

AT2G46790.1 Score: 1
AT5G24470.1 Score: 1

Expression data

Expressed Sequence Tags

At.1675
Arabidopsis thaliana unknown protein (At2g46790) mRNA, complete cds /cds=p(794,1729) /gb=AY099676
At.65052
Arabidopsis thaliana pseudo-response regulator, putative / timing of CAB expression 1-like protein, putative (AT2G46670) mRNA, complete cds /cds=p(1,552) /gb=NM_130232
Hv.4918
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf137g14, mRNA sequence /gb=AK252005
Mtr.16027
EST306017 KV2 Medicago truncatula cDNA clone KV2-11L8, mRNA sequence /clone=KV2-11L8 /gb=AW585322
Mtr.19448
MTYCY38TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV256565
Os.12795
Oryza sativa Japonica Group cDNA clone:J013001E13, full insert sequence /gb=AK120059
Os.80771
Oryza sativa Japonica Group cDNA clone:J013102G21, full insert sequence /cds=p(267,2138) /gb=AK067314
Sbi.10157
PIC1_53_A05.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence /gb=BM325806
Vvi.23600
CA12EI204IIF_C02 Cabernet Sauvignon Leaf - CA12EI Vitis vinifera cDNA clone CA12EI204IIF_C02 5', mRNA sequence /clone=CA12EI204IIF_C02 /clone_end=5' /gb=CA815595

Domain Architecture

Response_reg PF00072 AT2G46790.1
DomainStartEndBit scoreE-value
Response_reg3715391.62.5e-24
CCT417461852.4e-22

Sequences