Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT2G47850.2

Identification

Species:
Arabidopsis thaliana
Locus
AT2G47850
Gene model
AT2G47850.2
Description
zinc finger (CCCH-type) family protein
Family
C3H
3D structure (top 5)
1M9O 2E5S 2RHK 2CQE 2D9N
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.21006
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT2G47850) mRNA, complete cds /cds=p(281,1687) /gb=NM_130352
Vvi.8684
WIN1149.C21_O06 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1149_O06 3', mRNA sequence /clone=WIN1149_O06 /clone_end=3' /gb=EC993939

Domain Architecture

zf-CCCH PF00642 AT2G47850.2
DomainStartEndBit scoreE-value
zf-CCCH4672422.1e-09
zf-CCCH9111747.74e-11
zf-CCCH264290461.3e-10
zf-CCCH31033639.21.5e-08

Sequences