Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT3G06410.1

Identification

Species:
Arabidopsis thaliana
Locus
AT3G06410
Gene model
AT3G06410.1
Description
nucleic acid binding
Family
C3H
3D structure (top 5)
1M9O 2E5S 2CQE 2RPP 2D9N
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

477944 Score: 1

Vitis vinifera

GSVIVP00019796001 Score: 1

Expression data

Expressed Sequence Tags

At.21006
Arabidopsis thaliana zinc finger (CCCH-type) family protein (AT2G47850) mRNA, complete cds /cds=p(281,1687) /gb=NM_130352
At.22535
Arabidopsis thaliana nucleic acid binding (AT5G18550) mRNA, complete cds /cds=p(338,1735) /gb=NM_121860
At.27771
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-11-O09 /cds=p(267,1655) /gb=AK230312
Mtr.10686
EST647280 HOGA Medicago truncatula cDNA clone HOGA-31I22, mRNA sequence /clone=HOGA-31I22 /gb=CB894488

Domain Architecture

zf-CCCH PF00642 AT3G06410.1
DomainStartEndBit scoreE-value
zf-CCCH558146.21.2e-10
zf-CCCH10112744.63.4e-10
zf-CCCH14917545.42.1e-10
zf-CCCH30833447.93.6e-11
zf-CCCH35438039.51.2e-08

Sequences