Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT3G07670.1

Identification

Species:
Arabidopsis thaliana
Locus
AT3G07670
Gene model
AT3G07670.1
Description
SET domain-containing protein
Family
SET
3D structure (top 5)
2H21
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

896938 Score: 1

Cyanidioschyzon merolae

CMN207C Score: 1

Chlorella sp. NC64A

142047 Score: 1

Carica papaya

evm.TU.supercontig_136.37 Score: 1

Micromonas pusilla CCMP1545

2803 Score: 1

Micromonas sp. RCC299

97985 Score: 1

Ostreococcus lucimarinus

2778 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g49326.1 Score: 1

Ostreococcus tauri

19327 Score: 1

Physcomitrella patens

115268 Score: 1

Populus trichocarpa

573120 Score: 1

Sorghum bicolor

5055646 Score: 1

Selaginella moellendorffii

80789 Score: 1

Vitis vinifera

GSVIVP00029072001 Score: 1

Zea mays

GRMZM2G058700_P03 Score: 1
GRMZM2G077258_P03 Score: 1

Chlamydomonas reinhardtii

195549 Score: 1

Expression data

Expressed Sequence Tags

At.10573
Arabidopsis thaliana SET domain-containing protein (AT3G07670) mRNA, complete cds /cds=p(44,1558) /gb=NM_111646
Mtr.19378
MTYDZ13TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV259708
Os.68728
Oryza sativa Japonica Group cDNA clone:J033133G01, full insert sequence /cds=p(55,1563) /gb=AK103602
Vvi.10612
WIN021.C21_B04 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN021_B04 3', mRNA sequence /clone=WIN021_B04 /clone_end=3' /gb=EC923411
Vvi.23406
VV_PEa18c10.b1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence /gb=EV229318

Domain Architecture

SET PF00856 AT3G07670.1
DomainStartEndBit scoreE-value
SET75311190.54.3e-54
Rubis-subs-bind336471157.92.7e-44

Sequences