Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT3G24010.1

Identification

Species:
Arabidopsis thaliana
Locus
AT3G24010
Gene model
AT3G24010.1
Description
PHD finger family protein
Family
PHD
3D structure (top 5)
2JMI 1WEU 1X4I 1WEN 2VNF
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

479934 Score: 1

Cyanidioschyzon merolae

CMQ358C Score: 1

Coccomyxa sp. C-169

80840 Score: 1

Ostreococcus lucimarinus

27695 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g04980.1 Score: 1

Ostreococcus tauri

37042 Score: 1

Physcomitrella patens

224109 Score: 1

Populus trichocarpa

712459 Score: 1

Sorghum bicolor

4872469 Score: 1

Selaginella moellendorffii

270360 Score: 1

Zea mays

GRMZM2G178072_P02 Score: 1

Chlamydomonas reinhardtii

288229 Score: 1

Expression data

Expressed Sequence Tags

At.37610
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX822393
Mtr.5175
Medicago truncatula clone MTYF5_F6_F7_F81G-C-9 unknown mRNA /cds=p(53,796) /gb=BT051806
Os.9928
Oryza sativa Japonica Group cDNA clone:J013154F02, full insert sequence /cds=p(156,917) /gb=AK068424
Pth.12592
M103B11.5pR Populus female catkins cDNA library Populus trichocarpa cDNA clone M103B11 5', mRNA sequence /clone=M103B11 /clone_end=5' /gb=DN494533
Sbi.5084
PH1_28_G09.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor cDNA clone PH1_28_G09_A002 5', mRNA sequence /clone=PH1_28_G09_A002 /clone_end=5' /gb=CF430516 /gi=34443217
Vvi.16733
CAP0002_IF_D02 Vitis vinifera cv. cabernet sauvignon (Clone 8) Petiole - CAP Vitis vinifera cDNA clone CAP0002_IF_D02 5', mRNA sequence /clone=CAP0002_IF_D02 /clone_end=5' /gb=CF515557

Domain Architecture

PHD PF00628 AT3G24010.1
DomainStartEndBit scoreE-value
PHD18022756.21.2e-13

Sequences