Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT3G49930.1

Identification

Species:
Arabidopsis thaliana
Locus
AT3G49930
Gene model
AT3G49930.1
Description
zinc finger (C2H2 type) family protein
Family
C2H2
3D structure (top 5)
1A1H 2EBT 2EE8 2CSH 1X6H
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

485352 Score: 1

Sorghum bicolor

5000738 Score: 1

Zea mays

GRMZM2G099384_P01 Score: 1

Expression data

Expressed Sequence Tags

At.35551
Arabidopsis thaliana zinc finger (C2H2 type) family protein (AT3G49930) mRNA, complete cds /cds=p(1,648) /gb=NM_114853
At.6501
Arabidopsis thaliana AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding (AZF1) mRNA, complete cds /cds=p(71,808) /gb=NM_126145
Vvi.23739
VVL114F11_694242 CabSau Berry Postveraison Mixed Stages 36-38 (Brix > 15) under water deficit stress Vitis vinifera cDNA clone VVL114F11 5, mRNA sequence /clone=VVL114F11 /clone_end=5' /gb=DT036308

Domain Architecture

zf-C2H2 PF00096 AT3G49930.1
DomainStartEndBit scoreE-value
zf-C2H29411622.80.0013

Sequences