Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT3G55370.2

Identification

Species:
Arabidopsis thaliana
Locus
AT3G55370
Gene model
AT3G55370.2
Gene names and synonyms
OBP3 iHOP
Description
OBP3 (OBF-BINDING PROTEIN 3); DNA binding
Family
C2C2-Dof

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

485960 Score: 1

Carica papaya

evm.TU.supercontig_361.3 Score: 1

Arabidopsis thaliana

AT3G55370.1 Score: 1
AT3G55370.2 Score: 0.958

Oryza sativa subsp. japonica

LOC_Os05g02150.1 Score: 1

Populus trichocarpa

820338 Score: 1

Sorghum bicolor

3990925 Score: 1
4963725 Score: 1

Arabidopsis thaliana

AT3G55370.1 Score: 1
AT3G55370.2 Score: 1

Vitis vinifera

GSVIVP00021306001 Score: 1

Arabidopsis thaliana

AT3G55370.1 Score: 1
AT3G55370.2 Score: 1

Zea mays

GRMZM2G017470_P01 Score: 1
GRMZM2G179069_P01 Score: 1

Expression data

Expressed Sequence Tags

At.19958
Arabidopsis thaliana OBP3 (OBF-BINDING PROTEIN 3); DNA binding (OBP3) mRNA, complete cds /cds=p(136,1200) /gb=NM_202713
At.33412
Arabidopsis thaliana Dof-type zinc finger domain-containing protein (AT5G02460) mRNA, complete cds /cds=p(55,1254) /gb=NM_120324
At.50120
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX820837
Mtr.14856
EST611158 KVKC Medicago truncatula cDNA clone pKVKC-7F3, mRNA sequence /clone=pKVKC-7F3 /gb=BQ165289
Os.79683
Oryza sativa Japonica Group cDNA, clone: J090023P19, full insert sequence /gb=AK288349

Domain Architecture

zf-Dof PF02701 AT3G55370.2
DomainStartEndBit scoreE-value
zf-Dof71133137.34.3e-38

Sequences