Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT3G58680.1

Identification

Species:
Arabidopsis thaliana
Locus
AT3G58680
Gene model
AT3G58680.1
Gene names and synonyms
ATMBF1B iHOP
MBF1B iHOP
Description
ATMBF1B/MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B); DNA binding / transcription coactivator
Family
MBF1
3D structure (top 5)
2JVL 1X57 2EF8 3DNV 1Y7Y
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

907349 Score: 1

Arabidopsis thaliana

AT2G42680.1 Score: 1
AT3G58680.1 Score: 1

Chlorella sp. NC64A

28362 Score: 1

Carica papaya

evm.TU.supercontig_77.10 Score: 1

Coccomyxa sp. C-169

80640 Score: 1

Micromonas sp. RCC299

112665 Score: 1

Arabidopsis thaliana

AT2G42680.1 Score: 1
AT3G58680.1 Score: 1

Physcomitrella patens

179377 Score: 1

Populus trichocarpa

746459 Score: 1

Selaginella moellendorffii

140650 Score: 1

Chlamydomonas reinhardtii

76570 Score: 1

Expression data

Expressed Sequence Tags

Hv.3929
HVSMEh0091O21f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEh0091O21f, mRNA sequence /clone=HVSMEh0091O21f /gb=BE196301
Hv.743
HB105F05_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone HB105F05_SK.ab1 similar to (AF232062) multiprotein bridging factor 1 [Solanum tuberosum], mRNA sequence /clone=HB105F05_SK.ab1 /gb=BM816320
Mtr.12270
METB342TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY477480
Mtr.5581
EST1226229 MTY Medicago truncatula cDNA clone MTYAR54, mRNA sequence /clone=MTYAR54 /gb=DW017268
Os.27783
Oryza sativa Japonica Group cDNA clone:002-186-C04, full insert sequence /gb=AK120022
Os.97930
RECm0428 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone EI062C20, EI052E14, BI074H22, EI045L05, EI116K20, BI139J13, BI13 5', mRNA sequence /clone=EI062C20,_EI052E14,_BI074H22,_EI045L05,_EI116K20, _BI139J
Pba.10724
WS01213.B21_H24 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01213_H24 3', mRNA sequence /clone=WS01213_H24 /clone_end=3' /gb=CV234068
Pba.209
WS02526.BR_O17 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02526_O17 5', mRNA sequence /clone=WS02526_O17 /clone_end=5' /gb=DT479772
Ppa.11104
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_179377) mRNA, complete cds /cds=p(185,613) /gb=XM_001759067
Ppa.16643
BJ958913 pphf full-length cDNA libary Physcomitrella patens subsp. patens cDNA clone pphf38d19 3', mRNA sequence /clone=pphf38d19 /clone_end=3' /gb=BJ958913
Ppa.4373
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_110138) mRNA, complete cds /cds=p(204,632) /gb=XM_001771679
Ppa.71
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_186603) mRNA, complete cds /cds=p(174,593) /gb=XM_001767628
Pth.10724
WS02526.BR_O17 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02526_O17 5', mRNA sequence /clone=WS02526_O17 /clone_end=5' /gb=DT479772
Pth.17061
Populus trichocarpa clone WS0117_H20 unknown mRNA /cds=p(117,539) /gb=EF146354
Ptp.6700
T039B05 Populus apical shoot cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU832867
Sbi.14570
OX1_43_D04.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_43_D04_A002 5', mRNA sequence /clone=OX1_43_D04_A002 /clone_end=5' /gb=CN136520 /gi=45969451
Vca.4928
CBGZ22896.fwd CBGZ Volvox carteri f. nagariensis induced male 69-1b, 8kb neb notI Volvox carteri f. nagariensis cDNA clone CBGZ22896 5', mRNA sequence /clone=CBGZ22896 /clone_end=5' /gb=FD823207
Vvi.21101
WIN1019.C21_H18 Muscat Hamburg post-veraison pericarp normalized (WIN10) Vitis vinifera cDNA clone WIN1019_H18 3', mRNA sequence /clone=WIN1019_H18 /clone_end=3' /gb=EC974590

Domain Architecture

MBF1 PF08523 AT3G58680.1
DomainStartEndBit scoreE-value
MBF1979130.35.6e-36
HTH_38714152.91.1e-12

Sequences