Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT3G59960.1

Identification

Species:
Arabidopsis thaliana
Locus
AT3G59960
Gene model
AT3G59960.1
Gene names and synonyms
ASHH4 iHOP
Description
ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4)
Family
SET
3D structure (top 5)
2R3A 1H3I 3F9X 2RFI 1ML9
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

486462 Score: 1

Micromonas pusilla CCMP1545

23211 Score: 1

Micromonas sp. RCC299

83006 Score: 1

Ostreococcus lucimarinus

5434 Score: 1

Ostreococcus tauri

22195 Score: 1

Physcomitrella patens

33525 Score: 1

Expression data

Expressed Sequence Tags

At.25522
Arabidopsis thaliana ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3) (ASHH3) mRNA, complete cds /cds=p(254,1345) /gb=NM_129978
At.54011
Arabidopsis thaliana ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4) (ASHH4) mRNA, complete cds /cds=p(1,1059) /gb=NM_115859
Hv.2514
HVSMEg0018E08f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0018E08f, mRNA sequence /clone=HVSMEg0018E08f /gb=BG345006
Os.24146
Oryza sativa Japonica Group cDNA clone:J013095J16, full insert sequence /gb=AK067083

Domain Architecture

SET PF00856 AT3G59960.1
DomainStartEndBit scoreE-value
SET105234175.41.5e-49

Sequences