Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT3G62420.1

Identification

Species:
Arabidopsis thaliana
Locus
AT3G62420
Gene model
AT3G62420.1
Gene names and synonyms
ATBZIP53 iHOP
Description
ATBZIP53 (BASIC REGION/LEUCINE ZIPPER MOTIF 53); DNA binding / protein heterodimerization/ sequence-specific DNA binding / transcription factor
Family
bZIP
3D structure (top 5)
1HJB 1GD2 1T2K 2DGC 1FOS
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

486748 Score: 1

Carica papaya

evm.TU.supercontig_18.39 Score: 1

Oryza sativa subsp. japonica

LOC_Os12g37410.1 Score: 1
LOC_Os12g37415.1 Score: 1

Populus trichocarpa

816720 Score: 1

Sorghum bicolor

4892935 Score: 1

Vitis vinifera

GSVIVP00028111001 Score: 1

Zea mays

GRMZM2G179587_P01 Score: 1

Expression data

Expressed Sequence Tags

At.48798
Arabidopsis thaliana ATBZIP53 (BASIC REGION/LEUCINE ZIPPER MOTIF 53); DNA binding / protein heterodimerization/ sequence-specific DNA binding / tra> (ATBZIP53) mRNA, complete cds /cds=p(567,1007) /gb=NM_116107

Domain Architecture

bZIP_1 PF00170 AT3G62420.1
DomainStartEndBit scoreE-value
bZIP_1218437.64.4e-08
bZIP_2217534.24.6e-07

Sequences