Gene model: AT4G16420.1

Species: Arabidopsis thaliana Locus AT4G16420 Gene model AT4G16420.1 Gene names and synonyms ADA2B iHOP PRZ1 iHOP Description ADA2B (PROPORZ1); DNA binding / transcription factor Family MYB-related 3D structure (top 5) 2CUJ 2AQE 2ELJ 2ELK 2E5R
	PDB entry: 2CUJ 2AQE 2ELJ 2ELK 2E5R 1H8A 2K9N 2YUS 1GV2 2DIM 1X41 2DIP 2FC7 1GUU 1GVD 2CJJ 2D9A 1H89 2YUM 2CU7 2ROH 1ITY 1W0U 2IW5 2DIN 2JUH

• KEGG
• TAIR

• GabiPD
• PhosPhAT
• ProMEX

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

493242 Score: 1

Arabidopsis thaliana

AT4G16420.3 Score: 1
AT4G16420.1 Score: 0.993
AT4G16420.2 Score: 0.975

Cyanidioschyzon merolae

CMP134C Score: 1

Arabidopsis thaliana

AT4G16420.2 Score: 1
AT4G16420.1 Score: 0.984
AT4G16420.3 Score: 0.961

Carica papaya

evm.TU.supercontig_27.257 Score: 1

Coccomyxa sp. C-169

15201 Score: 1

Arabidopsis thaliana

AT4G16420.2 Score: 1
AT4G16420.1 Score: 0.992
AT4G16420.3 Score: 0.981

Micromonas pusilla CCMP1545

35008 Score: 1

Arabidopsis thaliana

AT4G16420.2 Score: 1
AT4G16420.1 Score: 0.992
AT4G16420.3 Score: 0.982

Ostreococcus lucimarinus

51202 Score: 1.01
2829 Score: 1

Arabidopsis thaliana

AT4G16420.1 Score: 1
AT4G16420.3 Score: 0.991
AT4G16420.2 Score: 0.981

Arabidopsis thaliana

AT4G16420.1 Score: 1
AT4G16420.3 Score: 1
AT4G16420.2 Score: 0.972

Oryza sativa subsp. japonica

LOC_Os03g53960.1 Score: 1
LOC_Os03g53960.2 Score: 1

Ostreococcus tauri

20688 Score: 1

Arabidopsis thaliana

AT4G16420.1 Score: 1
AT4G16420.3 Score: 1
AT4G16420.2 Score: 0.982

Physcomitrella patens

173268 Score: 1

Arabidopsis thaliana

AT4G16420.2 Score: 1
AT4G16420.1 Score: 0.99
AT4G16420.3 Score: 0.976

Sorghum bicolor

4867867 Score: 1

Arabidopsis thaliana

AT4G16420.1 Score: 1
AT4G16420.3 Score: 1
AT4G16420.2 Score: 0.973

Arabidopsis thaliana

AT4G16420.1 Score: 1
AT4G16420.3 Score: 0.982
AT4G16420.2 Score: 0.964

Vitis vinifera

GSVIVP00009957001 Score: 1

Arabidopsis thaliana

AT4G16420.1 Score: 1
AT4G16420.3 Score: 1
AT4G16420.2 Score: 0.973

Zea mays

GRMZM2G177958_P01 Score: 1
GRMZM2G129817_P01 Score: 0.908

• AthaMap - TFBS in the promoter of this gene
• eFP Browser - Uni Toronto - Natural Variation
• MPSS data
• eFP Browser - Uni Toronto - Abiotic stresses
• eFP Browser - Uni Toronto - Developmental processes
• NCBI EST Profile Viewer (UniGene: At.4412)
• NCBI EST Profile Viewer (UniGene: Os.59266)
• NCBI EST Profile Viewer (UniGene: Pba.9973)
• NCBI EST Profile Viewer (UniGene: Pth.11830)
• NCBI EST Profile Viewer (UniGene: Pth.9973)
• NCBI EST Profile Viewer (UniGene: Sbi.8578)
• NCBI EST Profile Viewer (UniGene: Vvi.12822)

At.4412

Arabidopsis thaliana ADA2B (PROPORZ1); DNA binding / transcription factor (ADA2B) mRNA, complete cds /cds=p(312,1775) /gb=NM_117737

Os.59266

Oryza sativa Japonica Group cDNA clone:J023128E10, full insert sequence /cds=p(258,1961) /gb=AK072597

Pba.9973

WS01919.C21_N13 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01919_N13 3', mRNA sequence /clone=WS01919_N13 /clone_end=3' /gb=DT470090

Pth.11830

F099P79.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F099P79 3', mRNA sequence /clone=F099P79 /clone_end=3' /gb=CK091432

Pth.9973

WS01919.C21_N13 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01919_N13 3', mRNA sequence /clone=WS01919_N13 /clone_end=3' /gb=DT470090

Sbi.8578

RHOH1_44_H08.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_44_H08_A002 5', mRNA sequence /clone=RHOH1_44_H08_A002 /clone_end=5' /gb=CN130944 /gi=45959951

Vvi.12822

WIN1138.C21_N05 Muscat Hamburg pre-veraison berry normalized (WIN11) Vitis vinifera cDNA clone WIN1138_N05 3', mRNA sequence /clone=WIN1138_N05 /clone_end=3' /gb=EC990184

protein sequence
transcript sequence