Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT4G18880.1

Identification

Species:
Arabidopsis thaliana
Locus
AT4G18880
Gene model
AT4G18880.1
Gene names and synonyms
AT-HSFA4A iHOP
HSFA4A iHOP
Description
AT-HSFA4A (Arabidopsis thaliana heat shock transcription factor A4A); DNA binding / transcription factor
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

492972 Score: 1

Carica papaya

evm.TU.supercontig_124.1 Score: 1

Populus trichocarpa

568665 Score: 1

Vitis vinifera

GSVIVP00035821001 Score: 1

Zea mays

GRMZM2G118453_P01 Score: 1

Expression data

Expressed Sequence Tags

At.1951
Arabidopsis thaliana AT4g18880/F13C5_50 mRNA, complete cds /cds=p(513,1718) /gb=AY125512
At.4244
Arabidopsis thaliana AT-HSFA5 (Arabidopsis thaliana heat shock transcription factor A5); DNA binding / transcription factor (AT-HSFA5) mRNA, complete cds /cds=p(68,1468) /gb=NM_117472
At.43916
Arabidopsis thaliana AT-HSFA4C (Arabidopsis thaliana heat shock transcription factor A4C); DNA binding / transcription factor (AT-HSFA4C) mRNA, complete cds /cds=p(683,1432) /gb=NM_203162
Mtr.22152
NF106H11DT1F1094 Drought Medicago truncatula cDNA clone NF106H11DT 5', mRNA sequence /clone=NF106H11DT /clone_end=5' /gb=BF636270
Os.18587
Oryza sativa Japonica Group cDNA clone:J033067M16, full insert sequence /gb=AK101824
Pth.11766
F069P67Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA sequence /gb=BI136536
Vvi.23635
S9B09290 Ripening Berries (VvS9) Vitis vinifera cDNA clone S9B09290, mRNA sequence /clone=S9B09290 /gb=EE101448

Domain Architecture

HSF_DNA-bind PF00447 AT4G18880.1
DomainStartEndBit scoreE-value
HSF_DNA-bind14184192.21.3e-54

Sequences