Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT4G24470.1

Identification

Species:
Arabidopsis thaliana
Locus
AT4G24470
Gene model
AT4G24470.1
Gene names and synonyms
TIFY1 iHOP
ZIM iHOP
Description
ZIM (ZINC-FINGER PROTEIN EXPRESSED IN INFLORESCENCE MERISTEM); transcription factor
Family
C2C2-GATA
3D structure (top 5)
3DFX 4GAT 1GNF 2KAE 2VUT
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

492399 Score: 1

Arabidopsis thaliana

AT4G24470.1 Score: 1
AT4G24470.2 Score: 1

Populus trichocarpa

551709 Score: 1

Arabidopsis thaliana

AT4G24470.1 Score: 1
AT4G24470.2 Score: 1

Arabidopsis thaliana

AT4G24470.1 Score: 1
AT4G24470.2 Score: 1

Vitis vinifera

GSVIVP00015084001 Score: 1

Arabidopsis thaliana

AT3G21175.1 Score: 1
AT3G21175.2 Score: 1
AT4G24470.1 Score: 1
AT4G24470.2 Score: 1

Zea mays

GRMZM2G058479_P02 Score: 1
GRMZM2G080509_P01 Score: 1
GRMZM2G058479_P01 Score: 0.989
GRMZM2G080509_P02 Score: 0.986

Expression data

Expressed Sequence Tags

At.1650
Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-58-N13 /cds=p(123,671) /gb=AK229337
Mtr.17775
EST529614 GPOD Medicago truncatula cDNA clone pGPOD-2M18 5' end, mRNA sequence /clone=pGPOD-2M18 /clone_end=5' /gb=BI308204
Mtr.3624
EST644617 GESD Medicago truncatula cDNA clone GESD-31N14, mRNA sequence /clone=GESD-31N14 /gb=CA991109
Pba.1091
WS0257.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0257_C20 3', mRNA sequence /clone=WS0257_C20 /clone_end=3' /gb=CV245349
Ppa.14095
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_145290) mRNA, complete cds /cds=p(1,903) /gb=XM_001777694
Ppa.2077
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_57561) mRNA, complete cds /cds=p(1,1188) /gb=XM_001764571
Ppa.20898
CAYY32031.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY32031 5', mRNA sequence /clone=CAYY32031 /clone_end=5' /gb=FC359782
Pth.1091
WS0257.B21_C20 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0257_C20 3', mRNA sequence /clone=WS0257_C20 /clone_end=3' /gb=CV245349
Ptp.1546
B003P30.3pR Hybrid aspen plasmid library Populus tremula x Populus tremuloides cDNA clone B003P30 3', mRNA sequence /clone=B003P30 /clone_end=3' /gb=CK089172
Vvi.1240
VVA018E12_54245 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVA018E12 5, mRNA sequence /clone=VVA018E12 /clone_end=5' /gb=BM437375
Vvi.12431
S1G03364 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G03364, mRNA sequence /clone=S1G03364 /gb=EE076015

Domain Architecture

tify PF06200 AT4G24470.1
DomainStartEndBit scoreE-value
tify7711255.41.9e-13
CCT14619066.21.1e-16
GATA21425155.51.8e-13

Sequences