Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT4G30860.1

Identification

Species:
Arabidopsis thaliana
Locus
AT4G30860
Gene model
AT4G30860.1
Gene names and synonyms
ASHR3 iHOP
SDG4 iHOP
Description
ASHR3 (ASH1-RELATED 3); protein binding / zinc ion binding
Family
SET
3D structure (top 5)
2F69 2R3A 1H3I 3F9X 2RFI
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

913388 Score: 1

Micromonas pusilla CCMP1545

21435 Score: 1

Populus trichocarpa

262550 Score: 1

Vitis vinifera

GSVIVP00017128001 Score: 1

Expression data

Expressed Sequence Tags

At.25522
Arabidopsis thaliana ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3) (ASHH3) mRNA, complete cds /cds=p(254,1345) /gb=NM_129978
At.26551
Arabidopsis thaliana unknown protein (At4g30860) mRNA, complete cds /cds=p(75,1568) /gb=AY050894
Hv.2514
HVSMEg0018E08f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0018E08f, mRNA sequence /clone=HVSMEg0018E08f /gb=BG345006
Os.24146
Oryza sativa Japonica Group cDNA clone:J013095J16, full insert sequence /gb=AK067083

Domain Architecture

SET PF00856 AT4G30860.1
DomainStartEndBit scoreE-value
SET320450183.36.2e-52

Sequences