Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT4G34000.1

Identification

Species:
Arabidopsis thaliana
Locus
AT4G34000
Gene model
AT4G34000.1
Gene names and synonyms
ABF3 iHOP
DPBF5 iHOP
Description
ABF3/DPBF5 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / protein binding / transcription activator/ transcription factor
Family
bZIP
3D structure (top 5)
1DH3 1HJB 1GU4 1A02 1T2K
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

491272 Score: 1

Arabidopsis thaliana

AT4G34000.1 Score: 1
AT4G34000.2 Score: 1

Arabidopsis thaliana

AT4G34000.1 Score: 1
AT4G34000.2 Score: 1

Carica papaya

evm.TU.supercontig_62.4 Score: 1

Populus trichocarpa

767577 Score: 1

Arabidopsis thaliana

AT4G34000.1 Score: 1
AT4G34000.2 Score: 1

Sorghum bicolor

5055942 Score: 1

Arabidopsis thaliana

AT4G34000.1 Score: 1
AT4G34000.2 Score: 1

Selaginella moellendorffii

266892 Score: 1
67189 Score: 1

Arabidopsis thaliana

AT1G49720.1 Score: 1
AT4G34000.1 Score: 1
AT4G34000.2 Score: 1

Arabidopsis thaliana

AT3G19290.1 Score: 1
AT4G34000.1 Score: 1
AT4G34000.2 Score: 1

Zea mays

GRMZM2G157722_P01 Score: 1
GRMZM2G178231_P02 Score: 1
GRMZM2G157722_P02 Score: 0.908

Expression data

Expressed Sequence Tags

At.21769
Arabidopsis thaliana ABF3/DPBF5 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / protein binding / transcription activator/ tran> (ABF3/DPBF5) mRNA, complete cds /cds=p(337,1701) /gb=NM_179159
Mtr.22269
Medicago truncatula clone MTYFD_FE_FF_FG1G-F-15 unknown mRNA /cds=p(73,531) /gb=BT052661
Os.4379
Oryza sativa (japonica cultivar-group) bZIP transcription factor (aba1) mRNA, complete cds /cds=p(94,1050) /gb=AY323482
Os.97858
Oryza sativa Japonica Group cDNA clone:J013049N23, full insert sequence /cds=p(75,1205) /gb=AK065873

Domain Architecture

bZIP_1 PF00170 AT4G34000.1
DomainStartEndBit scoreE-value
bZIP_136942742.51.5e-09
bZIP_2370425414.3e-09

Sequences