Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT4G34590.1

Identification

Species:
Arabidopsis thaliana
Locus
AT4G34590
Gene model
AT4G34590.1
Gene names and synonyms
ATB2 iHOP
ATBZIP11 iHOP
BZIP11 iHOP
GBF6 iHOP
Description
GBF6 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 11); DNA binding / protein heterodimerization/ transcription factor
Family
bZIP
3D structure (top 5)
1HJB 1T2K 1CI6 1FOS 1GD2
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

491198 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g03960.1 Score: 1

Sorghum bicolor

3992730 Score: 1

Arabidopsis thaliana

AT1G75390.1 Score: 1
AT4G34590.1 Score: 1

Expression data

Expressed Sequence Tags

At.135
Arabidopsis thaliana GBF6 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 11); DNA binding / protein heterodimerization/ transcription factor (GBF6) mRNA, complete cds /cds=p(589,1068) /gb=NM_119625
At.16252
Arabidopsis thaliana ATBZIP44 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 44); DNA binding / protein heterodimerization/ transcription factor (ATBZIP44) mRNA, complete cds /cds=p(527,1048) /gb=NM_106193
At.74204
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL23ZA01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX828626
Mtr.16539
EST393509 GVN Medicago truncatula cDNA clone pGVN-59B22, mRNA sequence /clone=pGVN-59B22 /gb=BE124474
Pba.578
WS02523.B21_O21 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_O21 3', mRNA sequence /clone=WS02523_O21 /clone_end=3' /gb=DT483917
Pba.8635
WS02522.B21_E03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02522_E03 3', mRNA sequence /clone=WS02522_E03 /clone_end=3' /gb=DT483316
Pth.17268
WS02522.B21_E03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02522_E03 3', mRNA sequence /clone=WS02522_E03 /clone_end=3' /gb=DT483316
Pth.578
Populus trichocarpa clone WS0122_J03 unknown mRNA /cds=p(649,1116) /gb=EF147315
Vvi.20651
WIN0536.C21_C01 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0536_C01 3', mRNA sequence /clone=WIN0536_C01 /clone_end=3' /gb=EC948595

Domain Architecture

bZIP_1 PF00170 AT4G34590.1
DomainStartEndBit scoreE-value
bZIP_1238636.78.6e-08
bZIP_2237730.27.4e-06

Sequences