Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: AT4G34610.1

Identification

Species:
Arabidopsis thaliana
Locus
AT4G34610
Gene model
AT4G34610.1
Gene names and synonyms
BLH6 iHOP
Description
BLH6 (BELL1-LIKE HOMEODOMAIN 5); DNA binding / transcription factor
Family
HB
3D structure (top 5)
2DMN 1B72 1PUF 1DU6 1X2N
PDB entry:

Genome Databases

External resources

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

912924 Score: 1

Arabidopsis thaliana

AT4G34610.1 Score: 1
AT4G34610.2 Score: 1

Arabidopsis thaliana

AT4G34610.1 Score: 1
AT4G34610.2 Score: 1

Arabidopsis thaliana

AT4G34610.1 Score: 1
AT4G34610.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os03g47740.2 Score: 1
LOC_Os03g47740.3 Score: 1
LOC_Os12g43950.1 Score: 1
LOC_Os12g43950.2 Score: 1
LOC_Os12g43950.3 Score: 1
LOC_Os12g43950.4 Score: 1
LOC_Os03g47740.1 Score: 0.994

Sorghum bicolor

5059881 Score: 1

Arabidopsis thaliana

AT4G34610.1 Score: 1
AT4G34610.2 Score: 1

Arabidopsis thaliana

AT4G34610.1 Score: 1
AT4G34610.2 Score: 1

Vitis vinifera

GSVIVP00035919001 Score: 1

Arabidopsis thaliana

AT4G34610.1 Score: 1
AT4G34610.2 Score: 1

Zea mays

GRMZM2G099319_P01 Score: 1

Expression data

Expressed Sequence Tags

At.14305
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX820985
At.23033
Arabidopsis thaliana BLH1 (embryo sac development arrest 29) (BLH1) mRNA, complete cds /cds=p(544,2586) /gb=NM_001036413
At.48946
Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds /cds=p(853,3072) /gb=AY050459
At.50395
Arabidopsis thaliana BLH6 (BELL1-LIKE HOMEODOMAIN 5); DNA binding / transcription factor (BLH6) mRNA, complete cds /cds=p(325,1923) /gb=NM_119627
At.69176
Arabidopsis thaliana At4g34610 gene, complete cds /cds=p(1,1599) /gb=BT012291
At.74048
Arabidopsis thaliana BLH7 (BELL1-LIKE HOMEODOMAIN 7); DNA binding / transcription factor (BLH7) mRNA, complete cds /cds=p(548,1996) /gb=NM_127194
Hv.12894
HVSMEg0016O14f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0016O14f, mRNA sequence /clone=HVSMEg0016O14f /gb=BG344928
Mtr.13534
NF004E06ST1F1000 Developing stem Medicago truncatula cDNA clone NF004E06ST 5', mRNA sequence /clone=NF004E06ST /clone_end=5' /gb=AW688195
Mtr.7013
AC4843 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY618467
Os.11805
Oryza sativa (japonica cultivar-group) Os11g0158600 (Os11g0158600) mRNA, complete cds /cds=p(1,1278) /gb=NM_001072340
Os.21068
Oryza sativa Japonica Group cDNA clone:J013104D06, full insert sequence /gb=AK099829
Os.27062
Oryza sativa Japonica Group cDNA, clone: J043023B19, full insert sequence /gb=AK287476
Os.7976
Oryza sativa Japonica Group cDNA clone:J023057H24, full insert sequence /gb=AK070543
Ptp.5611
G095P48.5pR Populus tension wood cDNA library Populus tremula x Populus tremuloides cDNA clone G095P48 5', mRNA sequence /clone=G095P48 /clone_end=5' /gb=DN493660
Sbi.14265
HS1_50_B01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_50_B01_A012 5', mRNA sequence /clone=HS1_50_B01_A012 /clone_end=5' /gb=CD210350 /gi=30945366
Sbi.1439
WOUND1_26_C01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_26_C01_A002 5', mRNA sequence /clone=WOUND1_26_C01_A002 /clone_end=5' /gb=CN145056 /gi=45983936

Domain Architecture

POX PF07526 AT4G34610.1
DomainStartEndBit scoreE-value
POX139269270.92.7e-78
Homeobox3163745.40.0032

Sequences